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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928456   DNA repair protein RAD5B-like 
 ghi-r.1   107929021   DNA repair protein RAD5B 
 bna-r.1   111207443   DNA repair protein RAD5B 
 bna-r.1   111213781   DNA repair protein RAD5B-like 
 gma-u.5   100806677   DNA repair protein RAD5B 
 vvi-u.5   100264745   DNA repair protein RAD5B 
 ppo-u.5   18096892   DNA repair protein RAD5B 
 mtr-u.5   25483011   DNA repair protein RAD5B 
 sly-u.5   101243672   DNA repair protein RAD5B 
 sot-r.1   102588387   putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 
 nta-r.1   107765948   DNA repair protein RAD5B-like 
 nta-r.1   107785868   DNA repair protein RAD5B-like 
 osa-u.5   4335086   DNA repair protein RAD5B 
 zma-u.5   100383801   Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 
 tae-r.2   123051313   DNA repair protein RAD5B 
 tae-r.2   123187267   DNA repair protein RAD5B 
 tae-r.2   123043442   DNA repair protein RAD5B 
 hvu-r.1   123424485   DNA repair protein RAD5B 
 sbi-r.1   8085740   DNA repair protein RAD5B 
 bdi-r.1   100835802   DNA repair protein RAD5B 

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Top 50 coexpressed genes to 107928456 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928456 (ghi-r.1 coexpression data)

CoexMap"107928456"


ghiLOC107928456 | Entrez gene ID : 107928456    
Species ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra ath cre cit
Paralog 2 2 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (557 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (93 genes)  IEA  
GO:0016818 [list] [network] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides  (1750 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9083 genes)  IEA  
Protein XP_016715186.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_016715186.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016715186.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928456
ghi-r.1
for
107929021
bna-r.1
for
111207443
bna-r.1
for
111213781
gma-u.5
for
100806677
vvi-u.5
for
100264745
ppo-u.5
for
18096892
mtr-u.5
for
25483011
sly-u.5
for
101243672
sot-r.1
for
102588387
nta-r.1
for
107765948
nta-r.1
for
107785868
osa-u.5
for
4335086
zma-u.5
for
100383801
tae-r.2
for
123051313
tae-r.2
for
123187267
tae-r.2
for
123043442
hvu-r.1
for
123424485
sbi-r.1
for
8085740
bdi-r.1
for
100835802


Ortholog ID: 11749
Species ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107928456 LOC107929021 LOC111207443 LOC111213781 LOC100806677 LOC100264745 LOC18096892 LOC25483011 LOC101243672 LOC102588387 LOC107765948 LOC107785868 LOC4335086 LOC100383801 LOC123051313 LOC123187267 LOC123043442 LOC123424485 LOC8085740 LOC100835802
Function* DNA repair protein RAD5B-like DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B-like DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 DNA repair protein RAD5B-like DNA repair protein RAD5B-like DNA repair protein RAD5B Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 11
mtr03420 Nucleotide excision repair 3
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 5
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 5
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03018 RNA degradation 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae03018 RNA degradation 3
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107928456 107929021 111207443 111213781 100806677 100264745 18096892 25483011 101243672 102588387 107765948 107785868 4335086 100383801 123051313 123187267 123043442 123424485 8085740 100835802
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