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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928776   probable polygalacturonase 
 ath-u.5   AT4G23820   Pectin lyase-like superfamily protein 
 ath-u.5   AT5G41870   Pectin lyase-like superfamily protein 
 gma-u.5   100818820   probable polygalacturonase 
 gma-u.5   100816170   probable polygalacturonase 
 gma-u.5   100785590   probable polygalacturonase 
 vvi-u.5   100250089   probable polygalacturonase 
 ppo-u.5   7497842   probable polygalacturonase 
 mtr-u.5   25490549   probable polygalacturonase 
 mtr-u.5   11437037   probable polygalacturonase 
 sly-u.5   101258581   probable polygalacturonase 
 osa-u.5   4339762   probable polygalacturonase 
 osa-u.5   4326618   probable polygalacturonase 
 zma-u.5   100273574   uncharacterized LOC100273574 
 zma-u.5   100283011   uncharacterized LOC100283011 
 zma-u.5   100384246   uncharacterized LOC100384246 

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Top 50 coexpressed genes to 107928776 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928776 (ghi-r.1 coexpression data)

CoexMap"107928776"


ghiLOC107928776 | Entrez gene ID : 107928776    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 1 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1780 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (164 genes)  IEA  
Protein XP_016715531.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  vacu 4,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016715531.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016715531.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928776
ath-u.5
for
AT4G23820
ath-u.5
for
AT5G41870
gma-u.5
for
100818820
gma-u.5
for
100816170
gma-u.5
for
100785590
vvi-u.5
for
100250089
ppo-u.5
for
7497842
mtr-u.5
for
25490549
mtr-u.5
for
11437037
sly-u.5
for
101258581
osa-u.5
for
4339762
osa-u.5
for
4326618
zma-u.5
for
100273574
zma-u.5
for
100283011
zma-u.5
for
100384246


Ortholog ID: 4953
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu sbi sbi bdi
Symbol LOC107909932 LOC107924269 AT4G23820 AT5G41870 LOC103861440 LOC103861445 LOC106441481 LOC106366733 LOC102613856 LOC100816170 LOC100818820 LOC100250089 LOC7497842 LOC25490549 LOC11437037 LOC101258581 LOC102591521 LOC107816298 LOC107795962 LOC4339762 LOC100283011 LOC100273574 LOC123078585 LOC123070151 LOC123443896 LOC8078349 LOC8054394 LOC100831849
Function* probable polygalacturonase probable polygalacturonase Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase putative polygalacturonase putative polygalacturonase probable polygalacturonase uncharacterized LOC100283011 uncharacterized LOC100273574 probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00270 Cysteine and methionine metabolism 2
mtr00330 Arginine and proline metabolism 2
mtr00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
bdi01240 Biosynthesis of cofactors 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909932 107924269 828482 834192 103861440 103861445 106441481 106366733 102613856 100816170 100818820 100250089 7497842 25490549 11437037 101258581 102591521 107816298 107795962 4339762 100283011 100273574 123078585 123070151 123443896 8078349 8054394 100831849
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