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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930423   KH domain-containing protein HEN4 
 ghi-r.1   107943655   flowering locus K homology domain 
 ghi-r.1   107925069   KH domain-containing protein HEN4 
 ath-u.5   AT1G51580   RNA-binding KH domain-containing protein 
 bra-r.6   103832837   KH domain-containing protein HEN4 
 bna-r.1   106427494   KH domain-containing protein HEN4 
 bna-r.1   106360492   KH domain-containing protein HEN4-like 
 cit-r.1   102616323   KH domain-containing protein HEN4 
 gma-u.5   100811725   KH domain-containing protein HEN4 
 gma-u.5   100806721   RNA-binding KH domain-containing protein RCF3 
 vvi-u.5   100251267   KH domain-containing protein HEN4 
 ppo-u.5   18102806   KH domain-containing protein HEN4 
 mtr-u.5   25491237   KH domain-containing protein HEN4 
 sly-u.5   101250196   KH domain-containing protein HEN4 
 sot-r.1   102591079   KH domain-containing protein At4g18375 
 nta-r.1   107793475   RNA-binding KH domain-containing protein RCF3 
 nta-r.1   107827107   RNA-binding KH domain-containing protein RCF3 
 osa-u.5   4347471   KH domain-containing protein HEN4 
 zma-u.5   100279560   RNA-binding KH domain-containing protein 
 tae-r.2   123112506   KH domain-containing protein HEN4 
 tae-r.2   123122011   KH domain-containing protein HEN4 
 tae-r.2   123104249   KH domain-containing protein HEN4 
 hvu-r.1   123399608   RNA-binding KH domain-containing protein RCF3-like 
 sbi-r.1   8054759   KH domain-containing protein HEN4 
 bdi-r.1   100835469   KH domain-containing protein HEN4 

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Top 50 coexpressed genes to 107930423 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930423 (ghi-r.1 coexpression data)

CoexMap"107930423"


ghiLOC107930423 | Entrez gene ID : 107930423    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (5166 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016717584.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  pero 1,  cyto 1,  extr 1,  cysk_plas 1  (predict for XP_016717584.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016717584.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930423
ghi-r.1
for
107943655
ghi-r.1
for
107925069
ath-u.5
for
AT1G51580
bra-r.6
for
103832837
bna-r.1
for
106427494
bna-r.1
for
106360492
cit-r.1
for
102616323
gma-u.5
for
100811725
gma-u.5
for
100806721
vvi-u.5
for
100251267
ppo-u.5
for
18102806
mtr-u.5
for
25491237
sly-u.5
for
101250196
sot-r.1
for
102591079
nta-r.1
for
107793475
nta-r.1
for
107827107
osa-u.5
for
4347471
zma-u.5
for
100279560
tae-r.2
for
123112506
tae-r.2
for
123122011
tae-r.2
for
123104249
hvu-r.1
for
123399608
sbi-r.1
for
8054759
bdi-r.1
for
100835469


Ortholog ID: 10512
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107930423 LOC107943655 LOC107925069 AT1G51580 LOC103832837 LOC106427494 LOC106360492 LOC102616323 LOC100811725 LOC100806721 LOC100251267 LOC18102806 LOC25491237 LOC101250196 LOC102591079 LOC107793475 LOC107827107 LOC4347471 LOC100279560 LOC123112506 LOC123122011 LOC123104249 LOC123399608 LOC8054759 LOC100835469
Function* KH domain-containing protein HEN4 flowering locus K homology domain KH domain-containing protein HEN4 RNA-binding KH domain-containing protein KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4-like KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3-like KH domain-containing protein HEN4 KH domain-containing protein HEN4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
bna04120 Ubiquitin mediated proteolysis 4
bna03410 Base excision repair 2
bna00310 Lysine degradation 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04120 Ubiquitin mediated proteolysis 4
bna03410 Base excision repair 2
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta03083 Polycomb repressive complex 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03020 RNA polymerase 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03020 RNA polymerase 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107930423 107943655 107925069 841583 103832837 106427494 106360492 102616323 100811725 100806721 100251267 18102806 25491237 101250196 102591079 107793475 107827107 4347471 100279560 123112506 123122011 123104249 123399608 8054759 100835469
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