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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G51580   RNA-binding KH domain-containing protein 
 ath-r.7   AT1G51580   RNA-binding KH domain-containing protein 
 ath-m.9   AT1G51580   RNA-binding KH domain-containing protein 
 ath-e.2   AT1G51580   RNA-binding KH domain-containing protein 
 ath-m.4.bio   AT1G51580   RNA-binding KH domain-containing protein 
 ath-m.4.hor   AT1G51580   RNA-binding KH domain-containing protein 
 ath-m.4.lig   AT1G51580   RNA-binding KH domain-containing protein 
 ath-m.4.str   AT1G51580   RNA-binding KH domain-containing protein 
 ath-m.4.tis   AT1G51580   RNA-binding KH domain-containing protein 
 gma-u.5   100811725   KH domain-containing protein HEN4 
 gma-u.5   100806721   RNA-binding KH domain-containing protein RCF3 
 vvi-u.5   100251267   KH domain-containing protein HEN4 
 ppo-u.5   18102806   KH domain-containing protein HEN4 
 mtr-u.5   25491237   KH domain-containing protein HEN4 
 sly-u.5   101250196   KH domain-containing protein HEN4 
 osa-u.5   4347471   KH domain-containing protein HEN4 
 zma-u.5   100279560   RNA-binding KH domain-containing protein 

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Top 50 coexpressed genes to AT1G51580 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G51580 (ath-u.5 coexpression data)

CoexMap"841583"


athAT1G51580 | Entrez gene ID : 841583      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_175569.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  nucl 1,  mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_175569.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_175569.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G51580

.
ath-r.7
for
AT1G51580

.
ath-m.9
for
AT1G51580

.
ath-e.2
for
AT1G51580

.
ath-m.4.bio
for
AT1G51580

.
ath-m.4.hor
for
AT1G51580

.
ath-m.4.lig
for
AT1G51580

.
ath-m.4.str
for
AT1G51580

.
ath-m.4.tis
for
AT1G51580

.
gma-u.5
for
100811725

.
gma-u.5
for
100806721

.
vvi-u.5
for
100251267

.
ppo-u.5
for
18102806

.
mtr-u.5
for
25491237

.
sly-u.5
for
101250196

.
osa-u.5
for
4347471

.
zma-u.5
for
100279560

.


Ortholog ID: 10512
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G51580 LOC100806721 LOC100811725 LOC101250196 LOC4347471 LOC100279560 LOC103832837 LOC100251267 LOC18102806 LOC25491237 LOC123112506 LOC123122011 LOC123399608 LOC107930423 LOC107925069 LOC106427494 LOC106360492 LOC8054759 LOC102591079 LOC102616323 LOC100835469 LOC107793475 LOC107827107
Function* RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3-like KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4-like KH domain-containing protein HEN4 KH domain-containing protein At4g18375 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein RCF3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03020 RNA polymerase 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
bna04120 Ubiquitin mediated proteolysis 4
bna03410 Base excision repair 2
bna00310 Lysine degradation 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04120 Ubiquitin mediated proteolysis 4
bna03410 Base excision repair 2
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta03083 Polycomb repressive complex 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841583 100806721 100811725 101250196 4347471 100279560 103832837 100251267 18102806 25491237 123112506 123122011 123399608 107930423 107925069 106427494 106360492 8054759 102591079 102616323 100835469 107793475 107827107
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