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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930822   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 ath-u.5   NDC1   NAD(P)H dehydrogenase C1 
 gma-u.5   100795521   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 vvi-u.5   100264660   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 ppo-u.5   7490188   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 mtr-u.5   11437509   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 sly-u.5   101263978   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 osa-u.5   4340478   uncharacterized LOC4340478 
 zma-u.5   100282489   uncharacterized LOC100282489 

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Top 50 coexpressed genes to 107930822 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930822 (ghi-r.1 coexpression data)

CoexMap"107930822"


ghiLOC107930822 | Entrez gene ID : 107930822    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (102 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0042372 [list] [network] phylloquinone biosynthetic process  (12 genes)  IEA  
GO:0019646 [list] [network] aerobic electron transport chain  (99 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0003955 [list] [network] NAD(P)H dehydrogenase (quinone) activity  (17 genes)  IEA  
Protein XP_016718059.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  plas 1,  extr 1,  pero 1  (predict for XP_016718059.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016718059.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930822
ath-u.5
for
NDC1
gma-u.5
for
100795521
vvi-u.5
for
100264660
ppo-u.5
for
7490188
mtr-u.5
for
11437509
sly-u.5
for
101263978
osa-u.5
for
4340478
zma-u.5
for
100282489


Ortholog ID: 10283
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107931253 LOC107930822 NDC1 LOC103847188 LOC111212609 LOC106419271 LOC102618551 LOC100795521 LOC100264660 LOC7490188 LOC11437509 LOC101263978 LOC102581506 LOC107800648 LOC107796444 LOC4340478 LOC100282489 LOC123161869 LOC123148304 LOC123407346 LOC8080027 LOC100823745 CHLRE_16g671000v5
Function* alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial NAD(P)H dehydrogenase C1 alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like uncharacterized LOC4340478 uncharacterized LOC100282489 alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 8
ghi00750 Vitamin B6 metabolism 6
ghi03010 Ribosome 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 8
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 8
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00270 Cysteine and methionine metabolism 8
zma01240 Biosynthesis of cofactors 5
zma00670 One carbon pool by folate 4
zma00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 7
tae01240 Biosynthesis of cofactors 6
tae00260 Glycine, serine and threonine metabolism 6
tae00270 Cysteine and methionine metabolism 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 3
bdi00270 Cysteine and methionine metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00360 Phenylalanine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00330 Arginine and proline metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107931253 107930822 830775 103847188 111212609 106419271 102618551 100795521 100264660 7490188 11437509 101263978 102581506 107800648 107796444 4340478 100282489 123161869 123148304 123407346 8080027 100823745 5717696
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