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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NDC1   NAD(P)H dehydrogenase C1 
 ath-r.7   NDC1   NAD(P)H dehydrogenase C1 
 ath-m.9   NDC1   NAD(P)H dehydrogenase C1 
 ath-e.2   NDC1   NAD(P)H dehydrogenase C1 
 ath-m.4.bio   NDC1   NAD(P)H dehydrogenase C1 
 ath-m.4.hor   NDC1   NAD(P)H dehydrogenase C1 
 ath-m.4.lig   NDC1   NAD(P)H dehydrogenase C1 
 ath-m.4.str   NDC1   NAD(P)H dehydrogenase C1 
 ath-m.4.tis   NDC1   NAD(P)H dehydrogenase C1 
 gma-u.5   100795521   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 vvi-u.5   100264660   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 ppo-u.5   7490188   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 mtr-u.5   11437509   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 sly-u.5   101263978   alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 
 osa-u.5   4340478   uncharacterized LOC4340478 
 zma-u.5   100282489   uncharacterized LOC100282489 

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Top 50 coexpressed genes to NDC1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NDC1 (ath-u.5 coexpression data)

CoexMap"830775"


athNDC1 | Entrez gene ID : 830775      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (40 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO:0042372 [list] [network] phylloquinone biosynthetic process  (10 genes)  IDA  
GO CC
GO:0005743 [list] [network] mitochondrial inner membrane  (49 genes)  IDA  
GO:0010287 [list] [network] plastoglobule  (57 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
GO:0003955 [list] [network] NAD(P)H dehydrogenase (quinone) activity  (3 genes)  IDA  
Protein NP_568205.6 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_568205.6)
Subcellular
localization
TargetP
chlo 9  (predict for NP_568205.6)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
NDC1

.
ath-r.7
for
NDC1

.
ath-m.9
for
NDC1

.
ath-e.2
for
NDC1

.
ath-m.4.bio
for
NDC1

.
ath-m.4.hor
for
NDC1

.
ath-m.4.lig
for
NDC1

.
ath-m.4.str
for
NDC1

.
ath-m.4.tis
for
NDC1

.
gma-u.5
for
100795521

.
vvi-u.5
for
100264660

.
ppo-u.5
for
7490188

.
mtr-u.5
for
11437509

.
sly-u.5
for
101263978

.
osa-u.5
for
4340478

.
zma-u.5
for
100282489

.


Ortholog ID: 10283
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol NDC1 LOC100795521 LOC101263978 LOC4340478 LOC100282489 LOC103847188 LOC100264660 LOC7490188 LOC11437509 LOC123161869 LOC123148304 LOC123407346 LOC107931253 LOC107930822 LOC111212609 LOC106419271 CHLRE_16g671000v5 LOC8080027 LOC102581506 LOC102618551 LOC100823745 LOC107800648 LOC107796444
Function* NAD(P)H dehydrogenase C1 alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial uncharacterized LOC4340478 uncharacterized LOC100282489 alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial uncharacterized protein alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00270 Cysteine and methionine metabolism 8
zma01240 Biosynthesis of cofactors 5
zma00670 One carbon pool by folate 4
zma00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 7
tae01240 Biosynthesis of cofactors 6
tae00260 Glycine, serine and threonine metabolism 6
tae00270 Cysteine and methionine metabolism 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 8
ghi00750 Vitamin B6 metabolism 6
ghi03010 Ribosome 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 8
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 8
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 3
bdi00270 Cysteine and methionine metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00360 Phenylalanine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830775 100795521 101263978 4340478 100282489 103847188 100264660 7490188 11437509 123161869 123148304 123407346 107931253 107930822 111212609 106419271 5717696 8080027 102581506 102618551 100823745 107800648 107796444
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