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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107931228   DExH-box ATP-dependent RNA helicase DExH8 
 ath-u.5   AT2G47680   zinc finger (CCCH type) helicase family protein 
 vvi-u.5   100250411   DExH-box ATP-dependent RNA helicase DExH8 
 ppo-u.5   18106934   DExH-box ATP-dependent RNA helicase DExH8 
 mtr-u.5   11416820   DExH-box ATP-dependent RNA helicase DExH8 
 sly-u.5   101257970   DExH-box ATP-dependent RNA helicase DExH8 
 osa-u.5   9270656   zinc finger CCCH domain-containing protein 4-like 
 zma-u.5   103634689   zinc finger CCCH domain-containing protein 4 

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Top 50 coexpressed genes to 107931228 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107931228 (ghi-r.1 coexpression data)

CoexMap"107931228"


ghiLOC107931228 | Entrez gene ID : 107931228    
Species ghi ath vvi ppo mtr sly osa zma bdi hvu bra cit gma bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005622 [list] [network] intracellular anatomical structure  (21132 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (292 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016718533.1 [sequence] [blastp]
XP_016718534.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  vacu 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_016718533.1)
chlo 4,  nucl 3,  mito 1,  cyto_mito 1,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_016718534.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016718533.1)
mito 4  (predict for XP_016718534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107931228
ath-u.5
for
AT2G47680
vvi-u.5
for
100250411
ppo-u.5
for
18106934
mtr-u.5
for
11416820
sly-u.5
for
101257970
osa-u.5
for
9270656
zma-u.5
for
103634689


Ortholog ID: 11670
Species ghi ghi ath bra bna bna cit vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107946074 LOC107931228 AT2G47680 LOC103866354 LOC106396062 LOC106450420 LOC102627459 LOC100250411 LOC18106934 LOC11416820 LOC101257970 LOC102584431 LOC142179342 LOC107828670 LOC9270656 LOC103634689 LOC123069568 LOC123078056 LOC123443405 LOC8072421 LOC100837365
Function* DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8 zinc finger (CCCH type) helicase family protein DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8-like DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8 DExH-box ATP-dependent RNA helicase DExH8 zinc finger CCCH domain-containing protein 31 DExH-box ATP-dependent RNA helicase DExH8-like DExH-box ATP-dependent RNA helicase DExH8 zinc finger CCCH domain-containing protein 4-like zinc finger CCCH domain-containing protein 4 zinc finger CCCH domain-containing protein 4 zinc finger CCCH domain-containing protein 4 zinc finger CCCH domain-containing protein 4 zinc finger CCCH domain-containing protein 4 zinc finger CCCH domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 3
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04626 Plant-pathogen interaction 3
tae00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 3
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01250 Biosynthesis of nucleotide sugars 3
sbi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107946074 107931228 819381 103866354 106396062 106450420 102627459 100250411 18106934 11416820 101257970 102584431 142179342 107828670 9270656 103634689 123069568 123078056 123443405 8072421 100837365
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