ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107931433	galactinol synthase 2
ghi-r.1	107893295	galactinol synthase 2
ghi-r.1	107893753	galactinol synthase 2
ghi-r.1	107912304	galactinol synthase 1
ath-u.5	GolS1	galactinol synthase 1
ath-u.5	GolS3	galactinol synthase 3
ath-u.5	GolS2	galactinol synthase 2
bra-r.6	103838671	galactinol synthase 2
bra-r.6	103838508	galactinol synthase 4
bra-r.6	103843850	galactinol synthase 1
bna-r.1	106392335	galactinol synthase 1-like
bna-r.1	106377002	galactinol synthase 3
bna-r.1	106379755	galactinol synthase 4-like
cit-r.1	102608882	galactinol synthase 2-like
cit-r.1	102616851	galactinol synthase 1
cit-r.1	102619819	galactinol synthase 1
gma-u.5	GOLS	galactinol synthase
gma-u.5	100800249	galactinol synthase 2
gma-u.5	100804007	galactinol synthase 2
vvi-u.5	100255485	galactinol synthase 1
vvi-u.5	100257918	galactinol synthase 2
vvi-u.5	100260126	galactinol synthase 2
ppo-u.5	7460481	galactinol synthase 1
ppo-u.5	7465228	galactinol synthase 2
ppo-u.5	7455409	galactinol synthase 1
mtr-u.5	11416930	galactinol synthase 2
mtr-u.5	11416931	galactinol synthase 2
mtr-u.5	11433093	galactinol synthase 1
sly-u.5	101261450	galactinol synthase 1
sly-u.5	101244339	galactinol synthase 2-like
sly-u.5	GolS2	galactinol synthase
sot-r.1	102592897	galactinol synthase 2-like
sot-r.1	102591561	galactinol synthase 1
sot-r.1	102589277	galactinol synthase 2
nta-r.1	107783847	galactinol synthase 2
nta-r.1	107763259	galactinol synthase 2
nta-r.1	107794006	galactinol synthase 1-like
osa-u.5	4344351	galactinol synthase 2
osa-u.5	4332654	galactinol synthase 1
zma-u.5	606405	galactinol synthase 2
zma-u.5	606403	galactinol synthase 1
tae-r.2	123187415	galactinol synthase 2
tae-r.2	123043587	galactinol synthase 2
hvu-r.1	123429407	galactinol synthase 2-like
hvu-r.1	123446536	galactinol synthase 2-like
hvu-r.1	123424659	galactinol synthase 2-like
sbi-r.1	8084956	galactinol synthase 2
sbi-r.1	8081053	galactinol synthase 2
bdi-r.1	100823302	galactinol synthase 1
bdi-r.1	100846042	galactinol synthase 2

Top 50 coexpressed genes to 107931433 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107931433 (ghi-r.1 coexpression data)

CoexMap"107931433"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00052 [list] [network] Galactose metabolism (140 genes)

GO BP

GO CC

GO MF

GO:0016757 [list] [network] glycosyltransferase activity

(1256 genes)

IEA

Protein

XP_016718796.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 4, pero 1

(predict for XP_016718796.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016718796.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107931433	ghi-r.1 for 107893295	ghi-r.1 for 107893753	ghi-r.1 for 107912304	ath-u.5 for GolS1	ath-u.5 for GolS3	ath-u.5 for GolS2	bra-r.6 for 103838671	bra-r.6 for 103838508	bra-r.6 for 103843850	bna-r.1 for 106392335	bna-r.1 for 106377002	bna-r.1 for 106379755	cit-r.1 for 102608882	cit-r.1 for 102616851	cit-r.1 for 102619819	gma-u.5 for GOLS	gma-u.5 for 100800249	gma-u.5 for 100804007	vvi-u.5 for 100255485	vvi-u.5 for 100257918	vvi-u.5 for 100260126	ppo-u.5 for 7460481	ppo-u.5 for 7465228	ppo-u.5 for 7455409	mtr-u.5 for 11416930	mtr-u.5 for 11416931	mtr-u.5 for 11433093	sly-u.5 for 101261450	sly-u.5 for 101244339	sly-u.5 for GolS2	sot-r.1 for 102592897	sot-r.1 for 102591561	sot-r.1 for 102589277	nta-r.1 for 107783847	nta-r.1 for 107763259	nta-r.1 for 107794006	osa-u.5 for 4344351	osa-u.5 for 4332654	zma-u.5 for 606405	zma-u.5 for 606403	tae-r.2 for 123187415	tae-r.2 for 123043587	hvu-r.1 for 123429407	hvu-r.1 for 123446536	hvu-r.1 for 123424659	sbi-r.1 for 8084956	sbi-r.1 for 8081053	bdi-r.1 for 100823302	bdi-r.1 for 100846042

Ortholog

Ortholog ID: 933

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC107931433

LOC107893295

LOC107933752

GolS3

GolS2

GolS4

GolS2

Function^*

galactinol synthase 2

galactinol synthase 3

galactinol synthase 2

galactinol synthase 4

galactinol synthase 1

galactinol synthase 1-like

galactinol synthase 3

galactinol synthase 1

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2-like

galactinol synthase

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1-like

galactinol synthase 2-like

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 2-like

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi00950	Isoquinoline alkaloid biosynthesis	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	5
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4
ath00460	Cyanoamino acid metabolism	3
ath00500	Starch and sucrose metabolism	3
ath00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	8
bra03040	Spliceosome	3
bra00052	Galactose metabolism	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	3
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma00052	Galactose metabolism	2
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	6
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi00906	Carotenoid biosynthesis	4
vvi04075	Plant hormone signal transduction	3
vvi00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	3
vvi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	5
ppo00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00910	Nitrogen metabolism	2
ppo01310	Nitrogen cycle	2
ppo00500	Starch and sucrose metabolism	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	5
mtr00941	Flavonoid biosynthesis	3
mtr00944	Flavone and flavonol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	14
mtr03040	Spliceosome	3
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	3
sly00940	Phenylpropanoid biosynthesis	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly00052	Galactose metabolism	4
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	8
nta00052	Galactose metabolism	3
nta03040	Spliceosome	2
nta04144	Endocytosis	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	6
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa00052	Galactose metabolism	3
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	4
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	4
sbi01200	Carbon metabolism	2
sbi00402	Benzoxazinoid biosynthesis	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00052	Galactose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107931433

107893295

107933752

837457

842114

842342

103838508

103843850

103866399

106392335

106377002

106436392

102616851

102628674

100809287

100819991

100792129

100257918

100260126

100261424

7465228

7473221

7492393

11416930

11416931

11433093

101261450

101244339

100316891

102592897

102591561

102589277

107763259

107794006

107814672

4344351

4332654

606405

606403

123043587

123184669

123429407

123446536

123424659

8084956

8081053

100823302

100846042

The preparation time of this page was 1.0 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	2	2	2	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107931433 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107931433 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**