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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107933324   60S ribosomal protein L17-2 
 ghi-r.1   121206464   60S ribosomal protein L17-1 
 ghi-r.1   107898628   60S ribosomal protein L17-2 
 ghi-r.1   107898629   60S ribosomal protein L17-2 
 ath-u.5   AT1G27400   Ribosomal protein L22p/L17e family protein 
 ath-u.5   AT1G67430   Ribosomal protein L22p/L17e family protein 
 bra-r.6   103829063   60S ribosomal protein L17-2 
 bra-r.6   103835398   60S ribosomal protein L17-1 
 bra-r.6   103831171   60S ribosomal protein L17-2 
 bna-r.1   106372951   60S ribosomal protein L17-2 
 bna-r.1   106405829   60S ribosomal protein L17-2-like 
 bna-r.1   125588629   60S ribosomal protein L17-2-like 
 cit-r.1   102628450   60S ribosomal protein L17-2 
 gma-u.5   100305777   60S ribosomal protein L17 
 gma-u.5   100816536   60S ribosomal protein L17-2 
 gma-u.5   100800781   60S ribosomal protein L17 
 vvi-u.5   100262608   large ribosomal subunit protein uL22y 
 vvi-u.5   100257483   large ribosomal subunit protein uL22y 
 vvi-u.5   100242281   large ribosomal subunit protein uL22y 
 ppo-u.5   7494771   60S ribosomal protein L17-2 
 ppo-u.5   7484470   60S ribosomal protein L17-2 
 ppo-u.5   7477021   60S ribosomal protein L17-2 
 mtr-u.5   11427020   60S ribosomal protein L17-2 
 mtr-u.5   25501741   60S ribosomal protein L17-1 
 sly-u.5   101264811   large ribosomal subunit protein uL22y 
 sly-u.5   101265739   large ribosomal subunit protein uL22z 
 sot-r.1   102580390   60S ribosomal protein L17-1-like 
 sot-r.1   102580731   60S ribosomal protein L17-1-like 
 sot-r.1   102577682   ribosomal protein PETRP-like 
 nta-r.1   107822290   large ribosomal subunit protein uL22z-like 
 nta-r.1   107767990   large ribosomal subunit protein uL22z-like 
 nta-r.1   107790705   large ribosomal subunit protein uL22y 
 osa-u.5   4346540   large ribosomal subunit protein uL22 
 osa-u.5   4346123   large ribosomal subunit protein uL22 
 zma-u.5   100272465   60S ribosomal protein L17 
 zma-u.5   100194089   60S ribosomal protein L17 
 zma-u.5   541667   ribosomal protein L17 
 tae-r.2   123120900   60S ribosomal protein L17-1 
 tae-r.2   123103375   60S ribosomal protein L17-1 
 tae-r.2   123111568   60S ribosomal protein L17-1 
 hvu-r.1   123407658   60S ribosomal protein L17-2 
 hvu-r.1   123452940   60S ribosomal protein L17-1 
 sbi-r.1   8060895   60S ribosomal protein L17 
 sbi-r.1   8060894   60S ribosomal protein L17 
 sbi-r.1   8065928   60S ribosomal protein L17 
 bdi-r.1   100842261   60S ribosomal protein L17-2 
 bdi-r.1   100843393   60S ribosomal protein L17-1 
 cre-r.1   CHLRE_13g568900v5   ribosomal protein L17 

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Top 50 coexpressed genes to 107933324 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107933324 (ghi-r.1 coexpression data)

CoexMap"107933324"


ghiLOC107933324 | Entrez gene ID : 107933324    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 3 3 2 2 3 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0002181 [list] [network] cytoplasmic translation  (214 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016721001.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for XP_016721001.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_016721001.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107933324
ghi-r.1
for
121206464
ghi-r.1
for
107898628
ghi-r.1
for
107898629
ath-u.5
for
AT1G27400
ath-u.5
for
AT1G67430
bra-r.6
for
103829063
bra-r.6
for
103835398
bra-r.6
for
103831171
bna-r.1
for
106372951
bna-r.1
for
106405829
bna-r.1
for
125588629
cit-r.1
for
102628450
gma-u.5
for
100305777
gma-u.5
for
100816536
gma-u.5
for
100800781
vvi-u.5
for
100262608
vvi-u.5
for
100257483
vvi-u.5
for
100242281
ppo-u.5
for
7494771
ppo-u.5
for
7484470
ppo-u.5
for
7477021
mtr-u.5
for
11427020
mtr-u.5
for
25501741
sly-u.5
for
101264811
sly-u.5
for
101265739
sot-r.1
for
102580390
sot-r.1
for
102580731
sot-r.1
for
102577682
nta-r.1
for
107822290
nta-r.1
for
107767990
nta-r.1
for
107790705
osa-u.5
for
4346540
osa-u.5
for
4346123
zma-u.5
for
100272465
zma-u.5
for
100194089
zma-u.5
for
541667
tae-r.2
for
123120900
tae-r.2
for
123103375
tae-r.2
for
123111568
hvu-r.1
for
123407658
hvu-r.1
for
123452940
sbi-r.1
for
8060895
sbi-r.1
for
8060894
sbi-r.1
for
8065928
bdi-r.1
for
100842261
bdi-r.1
for
100843393
cre-r.1
for
CHLRE_13g568900v5


Ortholog ID: 1683
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107898628 LOC107898629 LOC107931470 AT1G27400 AT1G67430 LOC103829063 LOC103835398 LOC103839039 LOC106353938 LOC106392065 LOC106425384 LOC102628450 LOC100305777 LOC100800781 LOC100499784 LOC100262608 LOC100257483 LOC100242281 LOC7494771 LOC7484470 LOC7477021 LOC11427020 LOC25501741 LOC101264811 LOC101265739 LOC102580390 LOC102580731 LOC102577682 LOC107832413 LOC107817504 LOC107832403 LOC4346540 LOC4346123 LOC100272465 LOC100194089 LOC100280639 LOC123120900 LOC123151755 LOC123156995 LOC123407658 LOC123452940 LOC8060895 LOC8060894 LOC8065928 LOC100842261 LOC100843393 CHLRE_13g568900v5
Function* 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 Ribosomal protein L22p/L17e family protein Ribosomal protein L22p/L17e family protein 60S ribosomal protein L17-2 60S ribosomal protein L17-1 60S ribosomal protein L17-1 60S ribosomal protein L17-2-like 60S ribosomal protein L17-2 60S ribosomal protein L17-1-like 60S ribosomal protein L17-2 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17-2 large ribosomal subunit protein uL22y large ribosomal subunit protein uL22y large ribosomal subunit protein uL22y 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-1 large ribosomal subunit protein uL22y large ribosomal subunit protein uL22z 60S ribosomal protein L17-1-like 60S ribosomal protein L17-1-like ribosomal protein PETRP-like large ribosomal subunit protein uL22z large ribosomal subunit protein uL22z large ribosomal subunit protein uL22z large ribosomal subunit protein uL22 large ribosomal subunit protein uL22 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17-1 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-1 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17-2 60S ribosomal protein L17-1 ribosomal protein L17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma01240 Biosynthesis of cofactors 3
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
sly00053 Ascorbate and aldarate metabolism 2
sly00562 Inositol phosphate metabolism 2
sly01240 Biosynthesis of cofactors 2
sly04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107898628 107898629 107931470 839630 843063 103829063 103835398 103839039 106353938 106392065 106425384 102628450 100305777 100800781 100499784 100262608 100257483 100242281 7494771 7484470 7477021 11427020 25501741 101264811 101265739 102580390 102580731 102577682 107832413 107817504 107832403 4346540 4346123 100272465 100194089 100280639 123120900 123151755 123156995 123407658 123452940 8060895 8060894 8065928 100842261 100843393 5719099
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