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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107933622   WD-40 repeat-containing protein MSI4 
 ghi-r.1   107907141   WD-40 repeat-containing protein MSI4 
 ghi-r.1   107937242   WD-40 repeat-containing protein MSI4 
 ghi-r.1   107937731   WD-40 repeat-containing protein MSI4 
 ath-u.5   FVE   Transducin family protein / WD-40 repeat family protein 
 ath-u.5   NFC5   nucleosome/chromatin assembly factor group C5 
 bra-r.6   103837963   WD-40 repeat-containing protein MSI4 
 bra-r.6   103849259   WD-40 repeat-containing protein MSI4 
 bra-r.6   103853344   WD-40 repeat-containing protein MSI5 
 bna-r.1   106447128   WD-40 repeat-containing protein MSI4-like 
 bna-r.1   106402159   WD-40 repeat-containing protein MSI4 
 bna-r.1   106397866   WD-40 repeat-containing protein MSI4-like 
 cit-r.1   102609856   WD-40 repeat-containing protein MSI4 
 cit-r.1   102606687   WD-40 repeat-containing protein MSI4-like 
 gma-u.5   100786023   WD-40 repeat-containing protein MSI4 
 gma-u.5   FVE   WD-40 repeat-containing protein MSI4-like 
 gma-u.5   100779302   WD-40 repeat-containing protein MSI4 
 vvi-u.5   100244563   WD-40 repeat-containing protein MSI4 
 vvi-u.5   100264505   WD-40 repeat-containing protein MSI4 
 ppo-u.5   18096751   WD-40 repeat-containing protein MSI4 
 ppo-u.5   18100383   WD-40 repeat-containing protein MSI4 
 ppo-u.5   18107675   WD-40 repeat-containing protein MSI4 
 mtr-u.5   11435298   WD-40 repeat-containing protein MSI4 
 mtr-u.5   11437707   WD-40 repeat-containing protein MSI4 
 sly-u.5   101243728   WD-40 repeat-containing protein MSI4 
 sly-u.5   101267299   WD-40 repeat-containing protein MSI4 
 sot-r.1   102597405   WD-40 repeat-containing protein MSI4-like 
 sot-r.1   102588976   WD-40 repeat-containing protein MSI4-like 
 nta-r.1   107822662   WD-40 repeat-containing protein MSI4-like 
 nta-r.1   107810461   WD-40 repeat-containing protein MSI4-like 
 nta-r.1   107814868   WD-40 repeat-containing protein MSI4 
 osa-u.5   4327826   WD-40 repeat-containing protein MSI4 
 zma-u.5   541934   nucleosome/chromatin assembly factor C 
 zma-u.5   103655968   WD-40 repeat-containing protein MSI4 
 zma-u.5   542087   nucleosome/chromatin assembly factor group C 
 tae-r.2   123061746   WD-40 repeat-containing protein MSI4 
 tae-r.2   123078839   WD-40 repeat-containing protein MSI4 
 tae-r.2   123070380   WD-40 repeat-containing protein MSI4 
 hvu-r.1   123444247   WD-40 repeat-containing protein MSI4-like 
 sbi-r.1   8069776   WD-40 repeat-containing protein MSI4 
 bdi-r.1   100843662   WD-40 repeat-containing protein MSI4 
 cre-r.1   CHLRE_06g268450v5   uncharacterized protein 

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Top 50 coexpressed genes to 107933622 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107933622 (ghi-r.1 coexpression data)

CoexMap"107933622"


ghiLOC107933622 | Entrez gene ID : 107933622    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 2 2 2 3 1 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03082 [list] [network] ATP-dependent chromatin remodeling (185 genes)
ghi03083 [list] [network] Polycomb repressive complex (148 genes)
GO BP
GO:0006338 [list] [network] chromatin remodeling  (356 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (81 genes)  IEA  
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
Protein XP_016721368.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_016721368.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016721368.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107933622
ghi-r.1
for
107907141
ghi-r.1
for
107937242
ghi-r.1
for
107937731
ath-u.5
for
FVE
ath-u.5
for
NFC5
bra-r.6
for
103837963
bra-r.6
for
103849259
bra-r.6
for
103853344
bna-r.1
for
106447128
bna-r.1
for
106402159
bna-r.1
for
106397866
cit-r.1
for
102609856
cit-r.1
for
102606687
gma-u.5
for
100786023
gma-u.5
for
FVE
gma-u.5
for
100779302
vvi-u.5
for
100244563
vvi-u.5
for
100264505
ppo-u.5
for
18096751
ppo-u.5
for
18100383
ppo-u.5
for
18107675
mtr-u.5
for
11435298
mtr-u.5
for
11437707
sly-u.5
for
101243728
sly-u.5
for
101267299
sot-r.1
for
102597405
sot-r.1
for
102588976
nta-r.1
for
107822662
nta-r.1
for
107810461
nta-r.1
for
107814868
osa-u.5
for
4327826
zma-u.5
for
541934
zma-u.5
for
103655968
zma-u.5
for
542087
tae-r.2
for
123061746
tae-r.2
for
123078839
tae-r.2
for
123070380
hvu-r.1
for
123444247
sbi-r.1
for
8069776
bdi-r.1
for
100843662
cre-r.1
for
CHLRE_06g268450v5


Ortholog ID: 3194
Species ghi ghi ghi ath ath bra bra bra bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107933622 LOC107907141 LOC107887249 FVE NFC5 LOC103837963 LOC103849259 LOC103853344 LOC106447128 LOC106376219 LOC102609856 LOC102606687 FVE LOC100779302 LOC100796979 LOC100244563 LOC100264505 LOC18096751 LOC18100383 LOC18107675 LOC11435298 LOC11437707 LOC101243728 LOC101267299 LOC102597405 LOC102588976 LOC107822662 LOC107810461 LOC107814868 LOC4327826 LOC541934 LOC103655968 LOC542087 LOC123061746 LOC123078839 LOC123070380 LOC123444247 LOC8069776 LOC100843662 CHLRE_06g268450v5
Function* WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 Transducin family protein / WD-40 repeat family protein nucleosome/chromatin assembly factor group C5 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI5 WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 nucleosome/chromatin assembly factor C WD-40 repeat-containing protein MSI4 nucleosome/chromatin assembly factor group C WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4-like WD-40 repeat-containing protein MSI4 WD-40 repeat-containing protein MSI4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
ghi03083 Polycomb repressive complex 4
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03013 Nucleocytoplasmic transport 3
ath03410 Base excision repair 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra03083 Polycomb repressive complex 3
bra01230 Biosynthesis of amino acids 3
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
vvi00220 Arginine biosynthesis 3
vvi01230 Biosynthesis of amino acids 3
vvi03010 Ribosome 3
vvi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03420 Nucleotide excision repair 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 4
mtr03460 Fanconi anemia pathway 3
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr00710 Carbon fixation by Calvin cycle 5
mtr01200 Carbon metabolism 5
mtr03082 ATP-dependent chromatin remodeling 3
mtr00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03440 Homologous recombination 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01230 Biosynthesis of amino acids 4
nta03013 Nucleocytoplasmic transport 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01230 Biosynthesis of amino acids 4
nta03013 Nucleocytoplasmic transport 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03440 Homologous recombination 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 2
zma03083 Polycomb repressive complex 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03083 Polycomb repressive complex 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03083 Polycomb repressive complex 6
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03083 Polycomb repressive complex 4
tae03015 mRNA surveillance pathway 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
sbi03410 Base excision repair 3
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 3
sbi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107933622 107907141 107887249 816471 829094 103837963 103849259 103853344 106447128 106376219 102609856 102606687 100781408 100779302 100796979 100244563 100264505 18096751 18100383 18107675 11435298 11437707 101243728 101267299 102597405 102588976 107822662 107810461 107814868 4327826 541934 103655968 542087 123061746 123078839 123070380 123444247 8069776 100843662 5721891
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