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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107933891  pentatricopeptide repeat-containing protein At3g49710 
 ath-u.5  AT3G49710  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100788251  pentatricopeptide repeat-containing protein At3g49710 
 gma-u.5  100798589  pentatricopeptide repeat-containing protein At3g49710 
 vvi-u.5  100241399  pentatricopeptide repeat-containing protein At3g49710 
 mtr-u.5  25490372  pentatricopeptide repeat-containing protein At3g49710 
 sly-u.5  101248719  pentatricopeptide repeat-containing protein At3g49710 

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Top 50 coexpressed genes to 107933891 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107933891 (ghi-r.1 coexpression data)

CoexMap"107933891"


ghiLOC107933891 | Entrez gene ID : 107933891
Species ghi ath gma vvi mtr sly bdi hvu bra cit bna ppo sbi osa sot nta cre tae zma
Paralog 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016721687.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_016721687.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016721687.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107933891


ath-u.5
for
AT3G49710


gma-u.5
for
100788251


gma-u.5
for
100798589


vvi-u.5
for
100241399


mtr-u.5
for
25490372


sly-u.5
for
101248719



Ortholog ID: 13171
Species ghi ghi ath bra bna bna cit gma gma vvi mtr sly sot nta nta
Symbol LOC107945338 LOC107933891 AT3G49710 LOC103873030 LOC106347395 LOC106446253 LOC102614971 LOC100788251 LOC100798589 LOC100241399 LOC25490372 LOC101248719 LOC102592951 LOC107830725 LOC107784912
Function* pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710-like pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710-like pentatricopeptide repeat-containing protein At3g49710-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107945338 107933891 824133 103873030 106347395 106446253 102614971 100788251 100798589 100241399 25490372 101248719 102592951 107830725 107784912
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