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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  25490372  pentatricopeptide repeat-containing protein At3g49710 
 mtr-r.5  25490372  pentatricopeptide repeat-containing protein At3g49710 
 gma-u.5  100788251  pentatricopeptide repeat-containing protein At3g49710 
 gma-u.5  100798589  pentatricopeptide repeat-containing protein At3g49710 
 ath-u.5  AT3G49710  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100241399  pentatricopeptide repeat-containing protein At3g49710 
 sly-u.5  101248719  pentatricopeptide repeat-containing protein At3g49710 

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Top 50 coexpressed genes to 25490372 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25490372 (mtr-u.5 coexpression data)

CoexMap"25490372"


mtrLOC25490372 | Entrez gene ID : 25490372
Species mtr gma ath vvi sly sbi nta bra osa cre cit hvu ppo bdi sot zma tae bna ghi
Paralog 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013459241.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  pero 2,  cyto_mito 2,  mito_plas 2  (predict for XP_013459241.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_013459241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
25490372

.

mtr-r.5
for
25490372

.

gma-u.5
for
100788251

.

gma-u.5
for
100798589

.

ath-u.5
for
AT3G49710

.

vvi-u.5
for
100241399

.

sly-u.5
for
101248719

.


Ortholog ID: 13171
Species ath gma gma sly bra vvi mtr ghi ghi bna bna sot cit nta nta
Symbol AT3G49710 LOC100788251 LOC100798589 LOC101248719 LOC103873030 LOC100241399 LOC25490372 LOC107945338 LOC107933891 LOC106347395 LOC106446253 LOC102592951 LOC102614971 LOC107830725 LOC107784912
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710-like pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710 pentatricopeptide repeat-containing protein At3g49710-like pentatricopeptide repeat-containing protein At3g49710-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824133 100788251 100798589 101248719 103873030 100241399 25490372 107945338 107933891 106347395 106446253 102592951 102614971 107830725 107784912
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