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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107935166   transcription factor bHLH148 
 ath-u.5   AT3G06590   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT3G17100   sequence-specific DNA binding transcription factor 
 ath-u.5   AT1G09250   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100802046   transcription factor bHLH149 
 gma-u.5   100786088   transcription factor bHLH147 
 gma-u.5   100792237   transcription factor bHLH147 
 vvi-u.5   100243127   transcription factor bHLH147 
 vvi-u.5   100252798   transcription factor bHLH149-like 
 ppo-u.5   18098569   transcription factor bHLH149 
 ppo-u.5   7485836   transcription factor bHLH147 
 ppo-u.5   7478893   transcription factor bHLH149 
 mtr-u.5   11411718   transcription factor bHLH148 
 mtr-u.5   11415973   transcription factor bHLH147 
 mtr-u.5   25484699   transcription factor bHLH149 
 sly-u.5   101265062   transcription factor bHLH148 
 sly-u.5   101252530   transcription factor bHLH149 
 osa-u.5   4332635   transcription factor bHLH148 
 osa-u.5   107281516   transcription factor bHLH149 
 zma-u.5   100274900   uncharacterized LOC100274900 
 zma-u.5   100303849   uncharacterized LOC100303849 

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Top 50 coexpressed genes to 107935166 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107935166 (ghi-r.1 coexpression data)

CoexMap"107935166"


ghiLOC107935166 | Entrez gene ID : 107935166    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 3 3 2 3 3 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016723214.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  cyto_nucl 3  (predict for XP_016723214.2)
Subcellular
localization
TargetP
chlo 8,  other 5  (predict for XP_016723214.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107935166
ath-u.5
for
AT3G06590
ath-u.5
for
AT3G17100
ath-u.5
for
AT1G09250
gma-u.5
for
100802046
gma-u.5
for
100786088
gma-u.5
for
100792237
vvi-u.5
for
100243127
vvi-u.5
for
100252798
ppo-u.5
for
18098569
ppo-u.5
for
7485836
ppo-u.5
for
7478893
mtr-u.5
for
11411718
mtr-u.5
for
11415973
mtr-u.5
for
25484699
sly-u.5
for
101265062
sly-u.5
for
101252530
osa-u.5
for
4332635
osa-u.5
for
107281516
zma-u.5
for
100274900
zma-u.5
for
100303849


Ortholog ID: 1382
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi bdi
Symbol LOC121209358 LOC107896604 AT1G09250 AT3G06590 LOC103870734 LOC103869714 LOC106404609 LOC106410241 LOC102628119 LOC102614299 LOC100807196 LOC100783462 LOC100252798 LOC100243127 LOC7478893 LOC18098569 LOC11411718 LOC25484699 LOC101265062 LOC101252530 LOC102584911 LOC102583760 LOC107806261 LOC107795528 LOC4332635 LOC107281516 LOC100274900 LOC100303849 LOC123184678 LOC123040555 LOC123446549 LOC123429410 LOC8081064 LOC100822091
Function* transcription factor bHLH149 transcription factor bHLH147 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH148 transcription factor bHLH147 transcription factor bHLH147 transcription factor bHLH147-like transcription factor bHLH149 transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH149 transcription factor bHLH149-like transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH149 transcription factor bHLH148 transcription factor bHLH149 transcription factor bHLH148 transcription factor bHLH149 transcription factor bHLH149 transcription factor bHLH148-like transcription factor bHLH149-like transcription factor bHLH148-like transcription factor bHLH148 transcription factor bHLH149 uncharacterized LOC100274900 uncharacterized LOC100303849 transcription factor bHLH147-like transcription factor bHLH147-like transcription factor bHLH148-like transcription factor bHLH149-like transcription factor bHLH147 transcription factor bHLH148
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00910 Nitrogen metabolism 2
cit01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
mtr00061 Fatty acid biosynthesis 2
mtr00620 Pyruvate metabolism 2
mtr00640 Propanoate metabolism 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121209358 107896604 837446 819838 103870734 103869714 106404609 106410241 102628119 102614299 100807196 100783462 100252798 100243127 7478893 18098569 11411718 25484699 101265062 101252530 102584911 102583760 107806261 107795528 4332635 107281516 100274900 100303849 123184678 123040555 123446549 123429410 8081064 100822091
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