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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936314   cyclic dof factor 2 
 ghi-r.1   107946520   cyclic dof factor 3 
 ghi-r.1   121204727   cyclic dof factor 2 
 ghi-r.1   107934268   cyclic dof factor 3 
 ath-u.5   CDF3   cycling DOF factor 3 
 ath-u.5   CDF2   cycling DOF factor 2 
 ath-u.5   CDF1   cycling DOF factor 1 
 bra-r.6   103863905   cyclic dof factor 2 
 bra-r.6   103855006   cyclic dof factor 1 
 bra-r.6   103850147   cyclic dof factor 2 
 bna-r.1   111207855   cyclic dof factor 1-like 
 bna-r.1   106435356   cyclic dof factor 3 
 bna-r.1   106352672   cyclic dof factor 2 
 cit-r.1   102615735   cyclic dof factor 2 
 cit-r.1   102612184   cyclic dof factor 3-like 
 cit-r.1   102629672   cyclic dof factor 3 
 gma-u.5   778113   cyclic dof factor 3 
 gma-u.5   100817354   cyclic dof factor 3 
 gma-u.5   100813787   zf-Dof domain-containing protein 
 vvi-u.5   100265355   cyclic dof factor 2 
 vvi-u.5   100257057   cyclic dof factor 3 
 vvi-u.5   100241530   cyclic dof factor 3 
 ppo-u.5   7464583   cyclic dof factor 3 
 ppo-u.5   7495982   cyclic dof factor 2 
 mtr-u.5   11410541   cyclic dof factor 2 
 mtr-u.5   11414470   cyclic dof factor 2 
 mtr-u.5   11435622   cyclic dof factor 1 
 sly-u.5   101262001   cyclic dof factor 1 
 sly-u.5   101248009   cyclic dof factor 1 
 sly-u.5   101243956   cyclic dof factor 1 
 sot-r.1   102597615   cyclic dof factor 1-like 
 sot-r.1   102603307   cyclic dof factor 1 
 sot-r.1   102600000   cyclic dof factor 3-like 
 nta-r.1   107832809   cyclic dof factor 1 
 nta-r.1   107830415   cyclic dof factor 1 
 nta-r.1   107823205   cyclic dof factor 1 
 osa-u.5   4344326   cyclic dof factor 2 
 osa-u.5   4331765   cyclic dof factor 1 
 osa-u.5   9272566   cyclic dof factor 2 
 zma-u.5   100275567   uncharacterized LOC100275567 
 zma-u.5   100275712   cyclic dof factor 2 
 zma-u.5   100276261   uncharacterized LOC100276261 
 tae-r.2   123069617   cyclic dof factor 2 
 tae-r.2   123061111   cyclic dof factor 3 
 tae-r.2   123061029   cyclic dof factor 2 
 hvu-r.1   123449559   cyclic dof factor 1-like 
 hvu-r.1   123443531   cyclic dof factor 3-like 
 hvu-r.1   123443453   cyclic dof factor 2 
 sbi-r.1   8085828   cyclic dof factor 2 
 sbi-r.1   8078579   cyclic dof factor 2 
 sbi-r.1   8082122   cyclic dof factor 1 
 bdi-r.1   100841048   cyclic dof factor 1 
 bdi-r.1   100837366   cyclic dof factor 2 
 bdi-r.1   100825862   cyclic dof factor 1 

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Top 50 coexpressed genes to 107936314 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936314 (ghi-r.1 coexpression data)

CoexMap"107936314"


ghiLOC107936314 | Entrez gene ID : 107936314    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016724501.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 1,  cyto 1,  chlo_mito 1  (predict for XP_016724501.2)
Subcellular
localization
TargetP
other 7  (predict for XP_016724501.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936314
ghi-r.1
for
107946520
ghi-r.1
for
121204727
ghi-r.1
for
107934268
ath-u.5
for
CDF3
ath-u.5
for
CDF2
ath-u.5
for
CDF1
bra-r.6
for
103863905
bra-r.6
for
103855006
bra-r.6
for
103850147
bna-r.1
for
111207855
bna-r.1
for
106435356
bna-r.1
for
106352672
cit-r.1
for
102615735
cit-r.1
for
102612184
cit-r.1
for
102629672
gma-u.5
for
778113
gma-u.5
for
100817354
gma-u.5
for
100813787
vvi-u.5
for
100265355
vvi-u.5
for
100257057
vvi-u.5
for
100241530
ppo-u.5
for
7464583
ppo-u.5
for
7495982
mtr-u.5
for
11410541
mtr-u.5
for
11414470
mtr-u.5
for
11435622
sly-u.5
for
101262001
sly-u.5
for
101248009
sly-u.5
for
101243956
sot-r.1
for
102597615
sot-r.1
for
102603307
sot-r.1
for
102600000
nta-r.1
for
107832809
nta-r.1
for
107830415
nta-r.1
for
107823205
osa-u.5
for
4344326
osa-u.5
for
4331765
osa-u.5
for
9272566
zma-u.5
for
100275567
zma-u.5
for
100275712
zma-u.5
for
100276261
tae-r.2
for
123069617
tae-r.2
for
123061111
tae-r.2
for
123061029
hvu-r.1
for
123449559
hvu-r.1
for
123443531
hvu-r.1
for
123443453
sbi-r.1
for
8085828
sbi-r.1
for
8078579
sbi-r.1
for
8082122
bdi-r.1
for
100841048
bdi-r.1
for
100837366
bdi-r.1
for
100825862


Ortholog ID: 658
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC107946520 LOC107924499 LOC107890451 CDF3 CDF2 CDF1 LOC103863905 LOC103855006 LOC103874677 LOC106435356 LOC106352672 LOC106432304 LOC102615735 LOC102612184 LOC102629672 LOC100788246 LOC100813315 LOC100788247 LOC100265355 LOC100257057 LOC100241530 LOC7495982 LOC7463038 LOC11410541 LOC11435622 LOC11409779 LOC101248009 LOC101243956 LOC101252243 LOC102603307 LOC102600000 LOC102582118 LOC107823205 LOC107804993 LOC107802463 LOC4344326 LOC4331765 LOC4324267 LOC100275567 LOC100275712 LOC100276261 LOC123061029 LOC123051520 LOC123078183 LOC123449559 LOC123443531 LOC123424683 LOC8085828 LOC8082122 LOC8054666 LOC100841048 LOC100825862 LOC100824853
Function* cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 1 cycling DOF factor 3 cycling DOF factor 2 cycling DOF factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 3-like cyclic dof factor 3 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 1 cyclic dof factor 3-like cyclic dof factor 2-like cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 uncharacterized LOC100275567 cyclic dof factor 2 uncharacterized LOC100276261 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 1-like cyclic dof factor 3-like cyclic dof factor 1-like cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00330 Arginine and proline metabolism 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
zma00052 Galactose metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107946520 107924499 107890451 823904 833962 836364 103863905 103855006 103874677 106435356 106352672 106432304 102615735 102612184 102629672 100788246 100813315 100788247 100265355 100257057 100241530 7495982 7463038 11410541 11435622 11409779 101248009 101243956 101252243 102603307 102600000 102582118 107823205 107804993 107802463 4344326 4331765 4324267 100275567 100275712 100276261 123061029 123051520 123078183 123449559 123443531 123424683 8085828 8082122 8054666 100841048 100825862 100824853
The preparation time of this page was 3.1 [sec].