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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936633   U-box domain-containing protein 4 
 ath-u.5   AT3G03440   ARM repeat superfamily protein 
 gma-u.5   100809684   U-box domain-containing protein 4 
 gma-u.5   100798093   U-box domain-containing protein 4 
 gma-u.5   100793971   U-box domain-containing protein 4 
 vvi-u.5   100241519   U-box domain-containing protein 4-like 
 ppo-u.5   18106655   U-box domain-containing protein 4 
 ppo-u.5   7487382   U-box domain-containing protein 4 
 mtr-u.5   11426107   U-box domain-containing protein 3 
 mtr-u.5   25489279   U-box domain-containing protein 4 
 sly-u.5   101263288   U-box domain-containing protein 4-like 
 sly-u.5   101257420   U-box domain-containing protein 4 
 osa-u.5   9266830   U-box domain-containing protein 3 
 zma-u.5   100281292   uncharacterized LOC100281292 
 zma-u.5   103649890   zinc finger BED domain-containing protein RICESLEEPER 2 

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Top 50 coexpressed genes to 107936633 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936633 (ghi-r.1 coexpression data)

CoexMap"107936633"


ghiLOC107936633 | Entrez gene ID : 107936633    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 1 2 2 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016724879.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 1,  vacu 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016724879.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_016724879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936633
ath-u.5
for
AT3G03440
gma-u.5
for
100809684
gma-u.5
for
100798093
gma-u.5
for
100793971
vvi-u.5
for
100241519
ppo-u.5
for
18106655
ppo-u.5
for
7487382
mtr-u.5
for
11426107
mtr-u.5
for
25489279
sly-u.5
for
101263288
sly-u.5
for
101257420
osa-u.5
for
9266830
zma-u.5
for
100281292
zma-u.5
for
103649890


Ortholog ID: 5304
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107936633 LOC107953914 AT3G03440 LOC103855160 LOC103844222 LOC106387300 LOC106387301 LOC102608055 LOC100793971 LOC100798093 LOC100241519 LOC18106655 LOC7487382 LOC11426107 LOC25489279 LOC101263288 LOC101257420 LOC102595141 LOC102599803 LOC107810943 LOC9266830 LOC103649890 LOC100281292 LOC123068195 LOC123059780 LOC123442376 LOC8070447 LOC100837860
Function* U-box domain-containing protein 4 U-box domain-containing protein 4 ARM repeat superfamily protein U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 3 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 armadillo repeat-containing protein 3 U-box domain-containing protein 4-like U-box domain-containing protein 45 U-box domain-containing protein 3 zinc finger BED domain-containing protein RICESLEEPER 2 uncharacterized LOC100281292 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma00940 Phenylpropanoid biosynthesis 3
gma00941 Flavonoid biosynthesis 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
mtr04075 Plant hormone signal transduction 3
mtr01230 Biosynthesis of amino acids 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00740 Riboflavin metabolism 3
bdi04136 Autophagy - other 3
bdi01240 Biosynthesis of cofactors 2
bdi04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936633 107953914 821253 103855160 103844222 106387300 106387301 102608055 100793971 100798093 100241519 18106655 7487382 11426107 25489279 101263288 101257420 102595141 102599803 107810943 9266830 103649890 100281292 123068195 123059780 123442376 8070447 100837860
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