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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487382   U-box domain-containing protein 4 
 ppo-r.4   7487382   U-box domain-containing protein 4 
 ppo-u.5   18106655   U-box domain-containing protein 4 
 gma-u.5   100809684   U-box domain-containing protein 4 
 gma-u.5   100798093   U-box domain-containing protein 4 
 gma-u.5   100793971   U-box domain-containing protein 4 
 mtr-u.5   11426107   U-box domain-containing protein 3 
 mtr-u.5   25489279   U-box domain-containing protein 4 
 ath-u.5   AT3G03440   ARM repeat superfamily protein 
 vvi-u.5   100241519   U-box domain-containing protein 4-like 
 sly-u.5   101263288   U-box domain-containing protein 4-like 
 sly-u.5   101257420   U-box domain-containing protein 4 
 osa-u.5   9266830   U-box domain-containing protein 3 
 zma-u.5   100281292   uncharacterized LOC100281292 
 zma-u.5   103649890   zinc finger BED domain-containing protein RICESLEEPER 2 

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Top 50 coexpressed genes to 7487382 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487382 (ppo-u.5 coexpression data)

CoexMap"7487382"


ppoLOC7487382 | Entrez gene ID : 7487382    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024455973.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  plas 1,  extr 1  (predict for XP_024455973.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_024455973.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487382

.
ppo-r.4
for
7487382

.
ppo-u.5
for
18106655

.
gma-u.5
for
100809684

.
gma-u.5
for
100798093

.
gma-u.5
for
100793971

.
mtr-u.5
for
11426107

.
mtr-u.5
for
25489279

.
ath-u.5
for
AT3G03440

.
vvi-u.5
for
100241519

.
sly-u.5
for
101263288

.
sly-u.5
for
101257420

.
osa-u.5
for
9266830

.
zma-u.5
for
100281292

.
zma-u.5
for
103649890

.


Ortholog ID: 5304
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta
Symbol AT3G03440 LOC100793971 LOC100798093 LOC101263288 LOC101257420 LOC9266830 LOC103649890 LOC100281292 LOC103855160 LOC103844222 LOC100241519 LOC18106655 LOC7487382 LOC11426107 LOC25489279 LOC123068195 LOC123059780 LOC123442376 LOC107936633 LOC107953914 LOC106387300 LOC106387301 LOC8070447 LOC102595141 LOC102599803 LOC102608055 LOC100837860 LOC107810943
Function* ARM repeat superfamily protein U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 3 zinc finger BED domain-containing protein RICESLEEPER 2 uncharacterized LOC100281292 U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 3 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 4 armadillo repeat-containing protein 3 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 45
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma00940 Phenylpropanoid biosynthesis 3
gma00941 Flavonoid biosynthesis 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
mtr04075 Plant hormone signal transduction 3
mtr01230 Biosynthesis of amino acids 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00740 Riboflavin metabolism 3
bdi04136 Autophagy - other 3
bdi01240 Biosynthesis of cofactors 2
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821253 100793971 100798093 101263288 101257420 9266830 103649890 100281292 103855160 103844222 100241519 18106655 7487382 11426107 25489279 123068195 123059780 123442376 107936633 107953914 106387300 106387301 8070447 102595141 102599803 102608055 100837860 107810943
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