Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936759   50S ribosomal protein L20 
 ath-u.5   AT1G16740   Ribosomal protein L20 
 gma-u.5   100527387   ribosomal protein L20 
 vvi-u.5   100263906   50S ribosomal protein L20-like 
 ppo-u.5   18099447   uncharacterized LOC18099447 
 mtr-u.5   25479775   50S ribosomal protein L20 
 mtr-u.5   11432309   50S ribosomal protein L20 
 sly-u.5   101261574   ribosomal protein L20 
 osa-u.5   4339398   uncharacterized LOC4339398 
 zma-u.5   100280565   50S ribosomal protein L20-like 

close


Top 50 coexpressed genes to 107936759 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107936759 (ghi-r.1 coexpression data)

CoexMap"107936759"


ghiLOC107936759 | Entrez gene ID : 107936759    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (68 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005761 [list] [network] mitochondrial ribosome  (76 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (209 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016725012.1 [sequence] [blastp]
XP_040936228.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  cyto_nucl 3,  chlo 3,  nucl 2,  mito 1  (predict for XP_016725012.1)
cyto 3,  cyto_nucl 3,  chlo 3,  nucl 2,  mito 1  (predict for XP_040936228.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_016725012.1)
other 5,  mito 5  (predict for XP_040936228.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936759
ath-u.5
for
AT1G16740
gma-u.5
for
100527387
vvi-u.5
for
100263906
ppo-u.5
for
18099447
mtr-u.5
for
25479775
mtr-u.5
for
11432309
sly-u.5
for
101261574
osa-u.5
for
4339398
zma-u.5
for
100280565


Ortholog ID: 5617
Species ghi ghi ath bra bra bna bna cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107951719 LOC107936759 AT1G16740 LOC103835988 LOC103872462 LOC106387593 LOC106365584 LOC102623378 LOC100527387 LOC100263906 LOC18099447 LOC25479775 LOC11432309 LOC101261574 LOC102601170 LOC107807860 LOC107789461 LOC4339398 LOC100280565 LOC123065627 LOC123063891 LOC123448883 LOC123440214 LOC8068962 LOC8062138 LOC100843048 LOC100841435 CHLRE_01g052350v5
Function* 50S ribosomal protein L20 50S ribosomal protein L20 Ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like 50S ribosomal protein L20-like uncharacterized LOC102623378 ribosomal protein L20 50S ribosomal protein L20-like uncharacterized LOC18099447 50S ribosomal protein L20 50S ribosomal protein L20 ribosomal protein L20 50S ribosomal protein L20 uncharacterized LOC107807860 uncharacterized LOC107789461 uncharacterized LOC4339398 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly00190 Oxidative phosphorylation 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03420 Nucleotide excision repair 3
sot03010 Ribosome 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03040 Spliceosome 6
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi00010 Glycolysis / Gluconeogenesis 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04145 Phagosome 4
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107951719 107936759 838245 103835988 103872462 106387593 106365584 102623378 100527387 100263906 18099447 25479775 11432309 101261574 102601170 107807860 107789461 4339398 100280565 123065627 123063891 123448883 123440214 8068962 8062138 100843048 100841435 5715777
The preparation time of this page was 0.1 [sec].