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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18099447   uncharacterized LOC18099447 
 ppo-r.4   18099447   uncharacterized LOC18099447 
 gma-u.5   100527387   ribosomal protein L20 
 mtr-u.5   25479775   50S ribosomal protein L20 
 mtr-u.5   11432309   50S ribosomal protein L20 
 ath-u.5   AT1G16740   Ribosomal protein L20 
 vvi-u.5   100263906   50S ribosomal protein L20-like 
 sly-u.5   101261574   ribosomal protein L20 
 osa-u.5   4339398   uncharacterized LOC4339398 
 zma-u.5   100280565   50S ribosomal protein L20-like 

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Top 50 coexpressed genes to 18099447 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18099447 (ppo-u.5 coexpression data)

CoexMap"18099447"


ppoLOC18099447 | Entrez gene ID : 18099447    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (33 genes)  IEA  
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (93 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_006383403.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 4,  nucl 3,  cyto 3,  mito 2,  chlo 1  (predict for XP_006383403.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_006383403.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18099447

.
ppo-r.4
for
18099447

.
gma-u.5
for
100527387

.
mtr-u.5
for
25479775

.
mtr-u.5
for
11432309

.
ath-u.5
for
AT1G16740

.
vvi-u.5
for
100263906

.
sly-u.5
for
101261574

.
osa-u.5
for
4339398

.
zma-u.5
for
100280565

.


Ortholog ID: 5617
Species ath gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AT1G16740 LOC100527387 LOC101261574 LOC4339398 LOC100280565 LOC103835988 LOC103872462 LOC100263906 LOC18099447 LOC25479775 LOC11432309 LOC123065627 LOC123063891 LOC123448883 LOC123440214 LOC107951719 LOC107936759 LOC106387593 LOC106365584 CHLRE_01g052350v5 LOC8068962 LOC8062138 LOC102601170 LOC102623378 LOC100843048 LOC100841435 LOC107807860 LOC107789461
Function* Ribosomal protein L20 ribosomal protein L20 ribosomal protein L20 uncharacterized LOC4339398 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like uncharacterized LOC18099447 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like 50S ribosomal protein L20-like 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20-like 50S ribosomal protein L20-like uncharacterized protein 50S ribosomal protein L20 50S ribosomal protein L20 50S ribosomal protein L20 uncharacterized LOC102623378 50S ribosomal protein L20 50S ribosomal protein L20 uncharacterized LOC107807860 uncharacterized LOC107789461
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly00190 Oxidative phosphorylation 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03040 Spliceosome 6
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04145 Phagosome 4
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi00010 Glycolysis / Gluconeogenesis 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03420 Nucleotide excision repair 3
sot03010 Ribosome 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838245 100527387 101261574 4339398 100280565 103835988 103872462 100263906 18099447 25479775 11432309 123065627 123063891 123448883 123440214 107951719 107936759 106387593 106365584 5715777 8068962 8062138 102601170 102623378 100843048 100841435 107807860 107789461
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