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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107937005   ubiquitin-conjugating enzyme E2 7 
 ath-u.5   UBC13   ubiquitin-conjugating enzyme 13 
 ath-u.5   UBC7   ubiquitin-conjugating enzyme E2 
 gma-u.5   100305813   uncharacterized LOC100305813 
 gma-u.5   100499900   ubiquitin-conjugating enzyme E2 
 gma-u.5   100500474   uncharacterized LOC100500474 
 vvi-u.5   100242812   ubiquitin-conjugating enzyme E2 7 
 ppo-u.5   7469819   ubiquitin-conjugating enzyme E2 14 
 ppo-u.5   7489575   ubiquitin-conjugating enzyme E2 7 
 ppo-u.5   7458153   ubiquitin-conjugating enzyme E2 7 
 mtr-u.5   11422025   ubiquitin-conjugating enzyme E2 7 
 mtr-u.5   25487868   ubiquitin-conjugating enzyme E2 7 
 sly-u.5   101262721   ubiquitin-conjugating enzyme E2 7 
 sly-u.5   101256619   ubiquitin-conjugating enzyme E2 7 
 sly-u.5   101262418   ubiquitin-conjugating enzyme E2 7 
 osa-u.5   4327386   ubiquitin-conjugating enzyme E2 7 
 osa-u.5   4339013   ubiquitin-conjugating enzyme E2 7 
 zma-u.5   100272466   uncharacterized LOC100272466 
 zma-u.5   100283106   ubiquitin-conjugating enzyme E2 7 
 zma-u.5   542600   ubiquitin-conjugating enzyme protein E2 

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Top 50 coexpressed genes to 107937005 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107937005 (ghi-r.1 coexpression data)

CoexMap"107937005"


ghiLOC107937005 | Entrez gene ID : 107937005    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 1 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (56 genes)  IEA  
Protein XP_016725306.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_016725306.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_016725306.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107937005
ath-u.5
for
UBC13
ath-u.5
for
UBC7
gma-u.5
for
100305813
gma-u.5
for
100499900
gma-u.5
for
100500474
vvi-u.5
for
100242812
ppo-u.5
for
7469819
ppo-u.5
for
7489575
ppo-u.5
for
7458153
mtr-u.5
for
11422025
mtr-u.5
for
25487868
sly-u.5
for
101262721
sly-u.5
for
101256619
sly-u.5
for
101262418
osa-u.5
for
4327386
osa-u.5
for
4339013
zma-u.5
for
100272466
zma-u.5
for
100283106
zma-u.5
for
542600


Ortholog ID: 1805
Species ghi ghi ath ath bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107959094 LOC107932760 UBC7 UBC13 LOC103851586 LOC106445353 LOC106420270 LOC102615059 LOC100305813 LOC100499900 LOC100242812 LOC7489575 LOC7458153 LOC11422025 LOC25487868 LOC101262418 LOC101262710 LOC102579737 LOC102605351 LOC107820117 LOC107767930 LOC4339013 LOC4327386 LOC100272466 LOC123062535 LOC123079694 LOC123445421 LOC123444937 LOC110430329 LOC8085448 LOC100840726 LOC100841313 CHLRE_12g546650v5
Function* ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 14 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 uncharacterized LOC100305813 ubiquitin-conjugating enzyme E2 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 uncharacterized LOC100272466 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 3
ghi04382 Cornified envelope formation 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi04141 Protein processing in endoplasmic reticulum 5
ghi04130 SNARE interactions in vesicular transport 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath04141 Protein processing in endoplasmic reticulum 3
ath00052 Galactose metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03050 Proteasome 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04712 Circadian rhythm - plant 2
vvi03022 Basal transcription factors 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04120 Ubiquitin mediated proteolysis 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 6
sot04120 Ubiquitin mediated proteolysis 4
sot04145 Phagosome 4
sot04141 Protein processing in endoplasmic reticulum 3
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 3
sot03010 Ribosome 2
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04120 Ubiquitin mediated proteolysis 3
nta00860 Porphyrin metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04120 Ubiquitin mediated proteolysis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04120 Ubiquitin mediated proteolysis 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 5
hvu03083 Polycomb repressive complex 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04130 SNARE interactions in vesicular transport 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 2
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959094 107932760 836048 823796 103851586 106445353 106420270 102615059 100305813 100499900 100242812 7489575 7458153 11422025 25487868 101262418 101262710 102579737 102605351 107820117 107767930 4339013 4327386 100272466 123062535 123079694 123445421 123444937 110430329 8085448 100840726 100841313 5719591
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