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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g546650v5   uncharacterized protein 
 ath-u.5   UBC13   ubiquitin-conjugating enzyme 13 
 ath-u.5   UBC7   ubiquitin-conjugating enzyme E2 
 gma-u.5   100305813   uncharacterized LOC100305813 
 gma-u.5   100499900   ubiquitin-conjugating enzyme E2 
 gma-u.5   100500474   uncharacterized LOC100500474 
 sly-u.5   101262418   ubiquitin-conjugating enzyme E2 7 
 sly-u.5   101262710   ubiquitin-conjugating enzyme E2 7 
 sly-u.5   101256619   ubiquitin-conjugating enzyme E2 7 
 osa-u.5   4339013   ubiquitin-conjugating enzyme E2 7 
 osa-u.5   4327386   ubiquitin-conjugating enzyme E2 7 
 zma-u.5   100283106   ubiquitin-conjugating enzyme E2 7 
 zma-u.5   542600   ubiquitin-conjugating enzyme protein E2 
 bra-r.6   103830011   ubiquitin-conjugating enzyme E2 14 
 bra-r.6   103841444   ubiquitin-conjugating enzyme E2 14 
 bra-r.6   103845355   ubiquitin-conjugating enzyme E2 7 
 vvi-u.5   100242812   ubiquitin-conjugating enzyme E2 7 
 ppo-u.5   7489575   ubiquitin-conjugating enzyme E2 7 
 ppo-u.5   7458153   ubiquitin-conjugating enzyme E2 7 
 ppo-u.5   7469819   ubiquitin-conjugating enzyme E2 14 
 mtr-u.5   25487868   ubiquitin-conjugating enzyme E2 7 
 mtr-u.5   11422025   ubiquitin-conjugating enzyme E2 7 
 tae-r.2   123059106   ubiquitin-conjugating enzyme E2 7 
 tae-r.2   123182266   ubiquitin-conjugating enzyme E2 7 
 tae-r.2   123062535   ubiquitin-conjugating enzyme E2 7 
 hvu-r.1   123445421   ubiquitin-conjugating enzyme E2 7-like 
 hvu-r.1   123444937   ubiquitin-conjugating enzyme E2 7 
 ghi-r.1   107906536   ubiquitin-conjugating enzyme E2 7 
 ghi-r.1   107937005   ubiquitin-conjugating enzyme E2 7 
 ghi-r.1   107943633   ubiquitin-conjugating enzyme E2 7 
 bna-r.1   125588880   ubiquitin-conjugating enzyme E2 14 
 bna-r.1   106445353   ubiquitin-conjugating enzyme E2 14 
 bna-r.1   111211364   ubiquitin-conjugating enzyme E2 14 
 sbi-r.1   8085448   ubiquitin-conjugating enzyme E2 7 
 sbi-r.1   110430329   ubiquitin-conjugating enzyme E2 7 
 sot-r.1   102579737   ubiquitin-conjugating enzyme E2 7-like 
 sot-r.1   102588776   ubiquitin-conjugating enzyme E2 7-like 
 sot-r.1   102605351   ubiquitin-conjugating enzyme E2 7-like 
 cit-r.1   102615059   ubiquitin-conjugating enzyme E2 7 
 bdi-r.1   100841313   ubiquitin-conjugating enzyme E2 7 
 bdi-r.1   100840726   ubiquitin-conjugating enzyme E2 7 
 nta-r.1   107784606   ubiquitin-conjugating enzyme E2 7 

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Top 50 coexpressed genes to CHLRE_12g546650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_12g546650v5 (cre-r.1 coexpression data)

CoexMap"5719591"


creCHLRE_12g546650v5 | Entrez gene ID : 5719591      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 2 3 3 2 2 3 1 3 2 3 2 3 3 2 3 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04120 [list] [network] Ubiquitin mediated proteolysis (48 genes)
cre04141 [list] [network] Protein processing in endoplasmic reticulum (76 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (40 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (159 genes)  IEA  
GO CC
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (9 genes)  IEA  
Protein XP_042919090.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1  (predict for XP_042919090.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042919090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g546650v5
ath-u.5
for
UBC13
ath-u.5
for
UBC7
gma-u.5
for
100305813
gma-u.5
for
100499900
gma-u.5
for
100500474
sly-u.5
for
101262418
sly-u.5
for
101262710
sly-u.5
for
101256619
osa-u.5
for
4339013
osa-u.5
for
4327386
zma-u.5
for
100283106
zma-u.5
for
542600
bra-r.6
for
103830011
bra-r.6
for
103841444
bra-r.6
for
103845355
vvi-u.5
for
100242812
ppo-u.5
for
7489575
ppo-u.5
for
7458153
ppo-u.5
for
7469819
mtr-u.5
for
25487868
mtr-u.5
for
11422025
tae-r.2
for
123059106
tae-r.2
for
123182266
tae-r.2
for
123062535
hvu-r.1
for
123445421
hvu-r.1
for
123444937
ghi-r.1
for
107906536
ghi-r.1
for
107937005
ghi-r.1
for
107943633
bna-r.1
for
125588880
bna-r.1
for
106445353
bna-r.1
for
111211364
sbi-r.1
for
8085448
sbi-r.1
for
110430329
sot-r.1
for
102579737
sot-r.1
for
102588776
sot-r.1
for
102605351
cit-r.1
for
102615059
bdi-r.1
for
100841313
bdi-r.1
for
100840726
nta-r.1
for
107784606


Ortholog ID: 1805
Species cre ath ath gma gma gma sly sly sly osa osa zma zma bra bra vvi ppo ppo ppo mtr mtr tae tae tae hvu hvu ghi ghi ghi bna bna bna sbi sbi sot sot sot cit bdi bdi nta nta nta
Symbol CHLRE_12g546650v5 UBC13 UBC7 LOC100305813 LOC100499900 LOC100500474 LOC101262418 LOC101262710 LOC101262721 LOC4339013 LOC4327386 LOC542600 LOC100272466 LOC103841444 LOC103851586 LOC100242812 LOC7489575 LOC7458153 LOC7469818 LOC25487868 LOC11422025 LOC123062535 LOC123071363 LOC123079694 LOC123445421 LOC123444937 LOC107959094 LOC107885937 LOC107932760 LOC106445353 LOC106420270 LOC106422860 LOC8085448 LOC110430329 LOC102579737 LOC102605351 LOC102580055 LOC102615059 LOC100841313 LOC100840726 LOC107819396 LOC107820117 LOC107767930
Function* uncharacterized protein ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme E2 uncharacterized LOC100305813 ubiquitin-conjugating enzyme E2 uncharacterized LOC100500474 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme protein E2 uncharacterized LOC100272466 ubiquitin-conjugating enzyme E2 14 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 14 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7-like ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7 ubiquitin-conjugating enzyme E2 7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04120 Ubiquitin mediated proteolysis 2
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath04141 Protein processing in endoplasmic reticulum 3
ath00052 Galactose metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma03050 Proteasome 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 8
gma04120 Ubiquitin mediated proteolysis 3
gma04144 Endocytosis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04120 Ubiquitin mediated proteolysis 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04120 Ubiquitin mediated proteolysis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04120 Ubiquitin mediated proteolysis 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 3
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04712 Circadian rhythm - plant 2
vvi03022 Basal transcription factors 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04130 SNARE interactions in vesicular transport 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 5
hvu03083 Polycomb repressive complex 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04130 SNARE interactions in vesicular transport 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 3
ghi04382 Cornified envelope formation 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 11
ghi04141 Protein processing in endoplasmic reticulum 8
ghi04130 SNARE interactions in vesicular transport 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi04141 Protein processing in endoplasmic reticulum 5
ghi04130 SNARE interactions in vesicular transport 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04517 IgSF CAM signaling 2
bna05100 Bacterial invasion of epithelial cells 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 6
sot04120 Ubiquitin mediated proteolysis 4
sot04145 Phagosome 4
sot04141 Protein processing in endoplasmic reticulum 3
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 3
sot03010 Ribosome 2
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot04144 Endocytosis 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 11
nta04141 Protein processing in endoplasmic reticulum 6
nta03083 Polycomb repressive complex 4
nta03015 mRNA surveillance pathway 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04120 Ubiquitin mediated proteolysis 3
nta00860 Porphyrin metabolism 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5719591 823796 836048 100305813 100499900 100500474 101262418 101262710 101262721 4339013 4327386 542600 100272466 103841444 103851586 100242812 7489575 7458153 7469818 25487868 11422025 123062535 123071363 123079694 123445421 123444937 107959094 107885937 107932760 106445353 106420270 106422860 8085448 110430329 102579737 102605351 102580055 102615059 100841313 100840726 107819396 107820117 107767930
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