ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107937094	uncharacterized LOC107937094
ghi-r.1	107886188	uncharacterized LOC107886188
ghi-r.1	107949612	uncharacterized LOC107949612
ghi-r.1	107948511	uncharacterized LOC107948511
ath-u.5	AT3G26890	meiosis chromosome segregation family protein
ath-u.5	AT5G41110	meiosis chromosome segregation family protein
bra-r.6	103875267	uncharacterized LOC103875267
bra-r.6	103864055	protein FAM214A
bra-r.6	103854287	uncharacterized LOC103854287
bna-r.1	106349310	uncharacterized LOC106349310
bna-r.1	106347732	uncharacterized LOC106347732
bna-r.1	106446211	uncharacterized LOC106446211
cit-r.1	102610344	uncharacterized LOC102610344
cit-r.1	102610610	uncharacterized LOC102610610
gma-u.5	102661628	protein FAM214B
gma-u.5	100819038	uncharacterized LOC100819038
gma-u.5	100806636	uncharacterized LOC100806636
vvi-u.5	100266395	uncharacterized LOC100266395
vvi-u.5	100256630	uncharacterized LOC100256630
ppo-u.5	7454588	uncharacterized LOC7454588
ppo-u.5	7495813	uncharacterized LOC7495813
ppo-u.5	7454752	uncharacterized LOC7454752
mtr-u.5	11440031	uncharacterized LOC11440031
mtr-u.5	11431161	uncharacterized LOC11431161
sly-u.5	101254883	uncharacterized LOC101254883
sot-r.1	102593551	uncharacterized LOC102593551
nta-r.1	107828991	uncharacterized LOC107828991
nta-r.1	107791319	uncharacterized LOC107791319
osa-u.5	4346160	uncharacterized LOC4346160
osa-u.5	4347533	uncharacterized LOC4347533
zma-u.5	103632967	uncharacterized LOC103632967
zma-u.5	100278774	uncharacterized LOC100278774
tae-r.2	123104338	uncharacterized LOC123104338
tae-r.2	123112620	uncharacterized LOC123112620
tae-r.2	123122109	uncharacterized LOC123122109
hvu-r.1	123399820	uncharacterized LOC123399820
hvu-r.1	123409984	uncharacterized LOC123409984
sbi-r.1	8058980	uncharacterized LOC8058980
sbi-r.1	8060597	uncharacterized LOC8060597
bdi-r.1	100820958	uncharacterized LOC100820958
bdi-r.1	100823798	uncharacterized LOC100823798

Top 50 coexpressed genes to 107937094 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107937094 (ghi-r.1 coexpression data)

CoexMap"107937094"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016725400.1 [sequence] [blastp]
XP_016725401.1 [sequence] [blastp]
XP_040972823.1 [sequence] [blastp]
XP_040972824.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_016725400.1)
nucl 10	(predict for XP_016725401.1)
nucl 10	(predict for XP_040972823.1)
nucl 10	(predict for XP_040972824.1)

Subcellular
localization
TargetP

other 8	(predict for XP_016725400.1)
other 8	(predict for XP_016725401.1)
other 8	(predict for XP_040972823.1)
other 8	(predict for XP_040972824.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107937094	ghi-r.1 for 107886188	ghi-r.1 for 107949612	ghi-r.1 for 107948511	ath-u.5 for AT3G26890	ath-u.5 for AT5G41110	bra-r.6 for 103875267	bra-r.6 for 103864055	bra-r.6 for 103854287	bna-r.1 for 106349310	bna-r.1 for 106347732	bna-r.1 for 106446211	cit-r.1 for 102610344	cit-r.1 for 102610610	gma-u.5 for 102661628	gma-u.5 for 100819038	gma-u.5 for 100806636	vvi-u.5 for 100266395	vvi-u.5 for 100256630	ppo-u.5 for 7454588	ppo-u.5 for 7495813	ppo-u.5 for 7454752	mtr-u.5 for 11440031	mtr-u.5 for 11431161	sly-u.5 for 101254883	sot-r.1 for 102593551	nta-r.1 for 107828991	nta-r.1 for 107791319	osa-u.5 for 4346160	osa-u.5 for 4347533	zma-u.5 for 103632967	zma-u.5 for 100278774	tae-r.2 for 123104338	tae-r.2 for 123112620	tae-r.2 for 123122109	hvu-r.1 for 123399820	hvu-r.1 for 123409984	sbi-r.1 for 8058980	sbi-r.1 for 8060597	bdi-r.1 for 100820958	bdi-r.1 for 100823798

Ortholog

Ortholog ID: 3465

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107937094

uncharacterized LOC107886188

uncharacterized LOC107949612

meiosis chromosome segregation family protein

uncharacterized LOC103875267

protein FAM214A

uncharacterized LOC103854287

uncharacterized LOC106446211

uncharacterized LOC106410263

uncharacterized BNAA02G28390D

uncharacterized LOC102610344

uncharacterized LOC102610610

uncharacterized LOC100819038

uncharacterized LOC100806636

uncharacterized LOC100793556

uncharacterized LOC100266395

uncharacterized LOC100256630

uncharacterized LOC7454588

uncharacterized LOC7495813

uncharacterized LOC7454752

uncharacterized LOC11440031

uncharacterized LOC11431161

uncharacterized LOC101254883

uncharacterized LOC102593551

uncharacterized LOC107828991

uncharacterized LOC107791319

uncharacterized LOC4346160

uncharacterized LOC4347533

uncharacterized LOC103632967

uncharacterized LOC100278774

uncharacterized LOC123104338

uncharacterized LOC123163202

uncharacterized LOC123164446

uncharacterized LOC123399820

uncharacterized LOC123409984

uncharacterized LOC8058980

uncharacterized LOC8060597

uncharacterized LOC100820958

uncharacterized LOC100823798

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03018	RNA degradation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	3
bra00250	Alanine, aspartate and glutamate metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra00910	Nitrogen metabolism	3
bra01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2
cit04145	Phagosome	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00760	Nicotinate and nicotinamide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2
nta04075	Plant hormone signal transduction	2
nta00500	Starch and sucrose metabolism	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4
nta04814	Motor proteins	2
nta04075	Plant hormone signal transduction	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3
zma04142	Lysosome	3
zma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00020	Citrate cycle (TCA cycle)	2
hvu00270	Cysteine and methionine metabolism	2
hvu00566	Sulfoquinovose metabolism	2
hvu00620	Pyruvate metabolism	2
hvu00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

107937094

107886188

107949612

822305

834113

103875267

103864055

103854287

106446211

106410263

106402188

102610344

102610610

100819038

100806636

100793556

100266395

100256630

7454588

7495813

7454752

11440031

11431161

101254883

102593551

107828991

107791319

4346160

4347533

103632967

100278774

123104338

123163202

123164446

123399820

123409984

8058980

8060597

100820958

100823798

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	2	3	2	3	2	1	1	2	2	2	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107937094 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107937094 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**