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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107938210   telomerase Cajal body protein 1 
 ghi-r.1   107922889   telomerase Cajal body protein 1 
 ath-u.5   AT4G21520   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103859109   telomerase Cajal body protein 1 
 bna-r.1   106375729   telomerase Cajal body protein 1-like 
 bna-r.1   106440072   telomerase Cajal body protein 1 
 cit-r.1   102628189   uncharacterized LOC102628189 
 gma-u.5   100810983   telomerase Cajal body protein 1 
 vvi-u.5   100267300   uncharacterized LOC100267300 
 ppo-u.5   7485592   uncharacterized LOC7485592 
 mtr-u.5   11425373   telomerase Cajal body protein 1 
 sly-u.5   101253742   uncharacterized LOC101253742 
 sot-r.1   102593887   telomerase Cajal body protein 1 
 nta-r.1   107788521   uncharacterized LOC107788521 
 nta-r.1   107773073   uncharacterized LOC107773073 
 osa-u.5   4334044   uncharacterized LOC4334044 
 zma-u.5   100194389   Transducin/WD40 repeat-like superfamily protein 
 tae-r.2   123091048   telomerase Cajal body protein 1 
 tae-r.2   123086930   telomerase Cajal body protein 1 
 tae-r.2   123096056   telomerase Cajal body protein 1 
 hvu-r.1   123447717   telomerase Cajal body protein 1 
 sbi-r.1   8060504   telomerase Cajal body protein 1 
 bdi-r.1   100835273   telomerase Cajal body protein 1 
 cre-r.1   CHLRE_07g326350v5   uncharacterized protein 

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Top 50 coexpressed genes to 107938210 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107938210 (ghi-r.1 coexpression data)

CoexMap"107938210"


ghiLOC107938210 | Entrez gene ID : 107938210    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016726781.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  vacu 1  (predict for XP_016726781.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016726781.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107938210
ghi-r.1
for
107922889
ath-u.5
for
AT4G21520
bra-r.6
for
103859109
bna-r.1
for
106375729
bna-r.1
for
106440072
cit-r.1
for
102628189
gma-u.5
for
100810983
vvi-u.5
for
100267300
ppo-u.5
for
7485592
mtr-u.5
for
11425373
sly-u.5
for
101253742
sot-r.1
for
102593887
nta-r.1
for
107788521
nta-r.1
for
107773073
osa-u.5
for
4334044
zma-u.5
for
100194389
tae-r.2
for
123091048
tae-r.2
for
123086930
tae-r.2
for
123096056
hvu-r.1
for
123447717
sbi-r.1
for
8060504
bdi-r.1
for
100835273
cre-r.1
for
CHLRE_07g326350v5


Ortholog ID: 9039
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107938210 LOC107922889 AT4G21520 LOC103859109 LOC106375729 LOC106440072 LOC102628189 LOC100810983 LOC100267300 LOC7485592 LOC11425373 LOC101253742 LOC102593887 LOC107788521 LOC107773073 LOC4334044 LOC100194389 LOC123091048 LOC123086930 LOC123096056 LOC123447717 LOC8060504 LOC100835273 CHLRE_07g326350v5
Function* telomerase Cajal body protein 1 telomerase Cajal body protein 1 Transducin/WD40 repeat-like superfamily protein telomerase Cajal body protein 1 telomerase Cajal body protein 1-like telomerase Cajal body protein 1 uncharacterized LOC102628189 telomerase Cajal body protein 1 uncharacterized LOC100267300 uncharacterized LOC7485592 telomerase Cajal body protein 1 uncharacterized LOC101253742 telomerase Cajal body protein 1 uncharacterized LOC107788521 uncharacterized LOC107773073 uncharacterized LOC4334044 Transducin/WD40 repeat-like superfamily protein telomerase Cajal body protein 1 telomerase Cajal body protein 1 telomerase Cajal body protein 1 telomerase Cajal body protein 1 telomerase Cajal body protein 1 telomerase Cajal body protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03018 RNA degradation 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03018 RNA degradation 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03460 Fanconi anemia pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa03010 Ribosome 2
osa03440 Homologous recombination 2
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107938210 107922889 828237 103859109 106375729 106440072 102628189 100810983 100267300 7485592 11425373 101253742 102593887 107788521 107773073 4334044 100194389 123091048 123086930 123096056 123447717 8060504 100835273 5716249
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