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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107938737   tobamovirus multiplication protein 3 
 ghi-r.1   121228310   protein TOM THREE HOMOLOG 1 
 ghi-r.1   121216014   protein TOM THREE HOMOLOG 1 
 ghi-r.1   107913491   tobamovirus multiplication protein 3 
 ath-u.5   TOM3   tobamovirus multiplication protein 3 
 ath-u.5   THH1   tobamovirus multiplication-like protein (DUF1084) 
 bra-r.6   103854013   tobamovirus multiplication protein 3 
 bra-r.6   103839445   tobamovirus multiplication protein 3 
 bna-r.1   106428472   tobamovirus multiplication protein 3 
 bna-r.1   106391292   tobamovirus multiplication protein 3-like 
 bna-r.1   106380891   protein TOM THREE HOMOLOG 1 
 cit-r.1   102629578   tobamovirus multiplication protein 3 
 gma-u.5   100811134   protein TOM THREE HOMOLOG 1-like 
 gma-u.5   100776183   tobamovirus multiplication protein 3 
 vvi-u.5   100266794   tobamovirus multiplication protein 3 
 mtr-u.5   25482642   tobamovirus multiplication protein 3 
 mtr-u.5   120577428   tobamovirus multiplication protein 3 
 sly-u.5   TH1   tobamovirus multiplication 1 homolog 
 sly-u.5   101252618   tobamovirus multiplication protein 3 
 sot-r.1   102590551   tobamovirus multiplication protein 3 
 sot-r.1   102590101   tobamovirus multiplication protein 3 
 nta-r.1   107769903   tobamovirus multiplication protein 3 
 nta-r.1   107784868   tobamovirus multiplication protein 3-like 
 nta-r.1   107821288   tobamovirus multiplication protein 3-like 
 osa-u.5   4349243   tobamovirus multiplication protein 3 
 osa-u.5   4331431   tobamovirus multiplication protein 3 
 osa-u.5   4330339   tobamovirus multiplication protein 3 
 zma-u.5   100285784   uncharacterized LOC100285784 
 zma-u.5   100273487   Tobamovirus multiplication protein 3 
 zma-u.5   100194226   uncharacterized LOC100194226 
 tae-r.2   123137796   tobamovirus multiplication protein 3 
 tae-r.2   123127113   tobamovirus multiplication protein 3 
 tae-r.2   123051114   tobamovirus multiplication protein 3 
 hvu-r.1   123404374   tobamovirus multiplication protein 3-like 
 hvu-r.1   123437326   tobamovirus multiplication protein 3-like 
 sbi-r.1   8062864   tobamovirus multiplication protein 3 
 sbi-r.1   8073207   tobamovirus multiplication protein 3 
 sbi-r.1   8085730   tobamovirus multiplication protein 3 
 bdi-r.1   100824718   tobamovirus multiplication protein 3 
 bdi-r.1   100826775   tobamovirus multiplication protein 3 

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Top 50 coexpressed genes to 107938737 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107938737 (ghi-r.1 coexpression data)

CoexMap"107938737"


ghiLOC107938737 | Entrez gene ID : 107938737    
Species ghi ath bra bna cit gma vvi mtr sly sot nta osa zma tae hvu sbi bdi cre ppo
Paralog 4 2 2 3 1 2 1 2 2 2 3 3 3 3 2 3 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016727459.1 [sequence] [blastp]
XP_040939041.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  plas 1,  vacu 1  (predict for XP_016727459.1)
cyto 9,  plas 1,  vacu 1  (predict for XP_040939041.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016727459.1)
other 9  (predict for XP_040939041.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107938737
ghi-r.1
for
121228310
ghi-r.1
for
121216014
ghi-r.1
for
107913491
ath-u.5
for
TOM3
ath-u.5
for
THH1
bra-r.6
for
103854013
bra-r.6
for
103839445
bna-r.1
for
106428472
bna-r.1
for
106391292
bna-r.1
for
106380891
cit-r.1
for
102629578
gma-u.5
for
100811134
gma-u.5
for
100776183
vvi-u.5
for
100266794
mtr-u.5
for
25482642
mtr-u.5
for
120577428
sly-u.5
for
TH1
sly-u.5
for
101252618
sot-r.1
for
102590551
sot-r.1
for
102590101
nta-r.1
for
107769903
nta-r.1
for
107784868
nta-r.1
for
107821288
osa-u.5
for
4349243
osa-u.5
for
4331431
osa-u.5
for
4330339
zma-u.5
for
100285784
zma-u.5
for
100273487
zma-u.5
for
100194226
tae-r.2
for
123137796
tae-r.2
for
123127113
tae-r.2
for
123051114
hvu-r.1
for
123404374
hvu-r.1
for
123437326
sbi-r.1
for
8062864
sbi-r.1
for
8073207
sbi-r.1
for
8085730
bdi-r.1
for
100824718
bdi-r.1
for
100826775


Ortholog ID: 2970
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma vvi mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC121228310 LOC121216014 LOC107913491 TOM3 THH1 LOC103854013 LOC103839445 LOC106428472 LOC106380891 LOC111213092 LOC102629578 LOC100811134 LOC100782852 LOC100266794 LOC25482642 LOC120577428 TH1 LOC101252618 LOC102590551 LOC102590101 LOC107769903 LOC107784868 LOC107831766 LOC4349243 LOC4331431 LOC4330339 LOC100285784 LOC100273487 LOC100193650 LOC123137796 LOC123127113 LOC123051114 LOC123404374 LOC123437326 LOC8062864 LOC8073207 LOC8085730 LOC100824718 LOC100826775
Function* protein TOM THREE HOMOLOG 1 protein TOM THREE HOMOLOG 1 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication-like protein (DUF1084) tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 protein TOM THREE HOMOLOG 1 protein TOM THREE HOMOLOG 1 tobamovirus multiplication protein 3 protein TOM THREE HOMOLOG 1-like tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication 1 homolog tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3-like tobamovirus multiplication protein 3-like tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 uncharacterized LOC100285784 Tobamovirus multiplication protein 3 uncharacterized LOC100193650 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3-like tobamovirus multiplication protein 3-like tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04130 SNARE interactions in vesicular transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03082 ATP-dependent chromatin remodeling 2
gma03050 Proteasome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04070 Phosphatidylinositol signaling system 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121228310 121216014 107913491 814749 838015 103854013 103839445 106428472 106380891 111213092 102629578 100811134 100782852 100266794 25482642 120577428 778313 101252618 102590551 102590101 107769903 107784868 107831766 4349243 4331431 4330339 100285784 100273487 100193650 123137796 123127113 123051114 123404374 123437326 8062864 8073207 8085730 100824718 100826775
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