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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   TH1   tobamovirus multiplication 1 homolog 
 sly-r.6   TH1   tobamovirus multiplication 1 homolog 
 sly-m.5   TH1   tobamovirus multiplication 1 homolog 
 sly-u.5   101252618   tobamovirus multiplication protein 3 
 ath-u.5   TOM3   tobamovirus multiplication protein 3 
 ath-u.5   THH1   tobamovirus multiplication-like protein (DUF1084) 
 gma-u.5   100776183   tobamovirus multiplication protein 3 
 gma-u.5   100782852   tobamovirus multiplication protein 3 
 vvi-u.5   100266794   tobamovirus multiplication protein 3 
 mtr-u.5   25482642   tobamovirus multiplication protein 3 
 mtr-u.5   120577428   tobamovirus multiplication protein 3 
 osa-u.5   4349243   tobamovirus multiplication protein 3 
 osa-u.5   4331431   tobamovirus multiplication protein 3 
 osa-u.5   4330339   tobamovirus multiplication protein 3 
 zma-u.5   100285784   uncharacterized LOC100285784 
 zma-u.5   100273487   Tobamovirus multiplication protein 3 
 zma-u.5   100193650   uncharacterized LOC100193650 

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Top 50 coexpressed genes to TH1 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TH1 (sly-u.5 coexpression data)

CoexMap"778313"


slyTH1 | Entrez gene ID : 778313      
Species sly ath gma vvi mtr osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 4 2 2 1 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001234096.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 3,  cyto 2,  nucl_plas 2,  golg_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2  (predict for NP_001234096.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001234096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
TH1

.
sly-r.6
for
TH1

.
sly-m.5
for
TH1

.
sly-u.5
for
101252618

.
ath-u.5
for
TOM3

.
ath-u.5
for
THH1

.
gma-u.5
for
100776183

.
gma-u.5
for
100782852

.
vvi-u.5
for
100266794

.
mtr-u.5
for
25482642

.
mtr-u.5
for
120577428

.
osa-u.5
for
4349243

.
osa-u.5
for
4331431

.
osa-u.5
for
4330339

.
zma-u.5
for
100285784

.
zma-u.5
for
100273487

.
zma-u.5
for
100193650

.


Ortholog ID: 2970
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol THH1 TOM3 LOC100782852 LOC100811134 LOC101252618 TH1 LOC4349243 LOC4330339 LOC100273487 LOC100285784 LOC103854013 LOC103839445 LOC100266794 LOC25482642 LOC120577428 LOC123137796 LOC123127113 LOC123437326 LOC123404374 LOC121216014 LOC107913491 LOC111213092 LOC106428472 LOC8062864 LOC8085730 LOC102590551 LOC102590101 LOC102629578 LOC100824718 LOC100826775 LOC107769903 LOC107784868
Function* tobamovirus multiplication-like protein (DUF1084) tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 protein TOM THREE HOMOLOG 1-like tobamovirus multiplication protein 3 tobamovirus multiplication 1 homolog tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 Tobamovirus multiplication protein 3 uncharacterized LOC100285784 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3-like tobamovirus multiplication protein 3-like protein TOM THREE HOMOLOG 1 tobamovirus multiplication protein 3 protein TOM THREE HOMOLOG 1 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3 tobamovirus multiplication protein 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03082 ATP-dependent chromatin remodeling 2
gma03050 Proteasome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04130 SNARE interactions in vesicular transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly04070 Phosphatidylinositol signaling system 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838015 814749 100782852 100811134 101252618 778313 4349243 4330339 100273487 100285784 103854013 103839445 100266794 25482642 120577428 123137796 123127113 123437326 123404374 121216014 107913491 111213092 106428472 8062864 8085730 102590551 102590101 102629578 100824718 100826775 107769903 107784868
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