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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107938847   proteasome assembly chaperone 2 
 ath-u.5   AT3G18940   clast3-like protein 
 gma-u.5   100812348   proteasome assembly chaperone 2 
 gma-u.5   100799566   proteasome assembly chaperone 2 
 vvi-u.5   100243552   uncharacterized LOC100243552 
 ppo-u.5   112327304   uncharacterized LOC112327304 
 ppo-u.5   7461186   uncharacterized LOC7461186 
 mtr-u.5   25492682   proteasome assembly chaperone 2 
 sly-u.5   101258795   uncharacterized LOC101258795 
 osa-u.5   4334232   uncharacterized LOC4334232 
 zma-u.5   100194052   uncharacterized LOC100194052 

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Top 50 coexpressed genes to 107938847 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107938847 (ghi-r.1 coexpression data)

CoexMap"107938847"


ghiLOC107938847 | Entrez gene ID : 107938847    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043248 [list] [network] proteasome assembly  (20 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
Protein XP_016727579.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 2,  chlo_mito 2,  cyto 1  (predict for XP_016727579.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016727579.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107938847

.
ath-u.5
for
AT3G18940

.
gma-u.5
for
100812348

.
gma-u.5
for
100799566

.
vvi-u.5
for
100243552

.
ppo-u.5
for
112327304

.
ppo-u.5
for
7461186

.
mtr-u.5
for
25492682

.
sly-u.5
for
101258795

.
osa-u.5
for
4334232

.
zma-u.5
for
100194052

.


Ortholog ID: 7221
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi cit bdi nta nta
Symbol AT3G18940 LOC100812348 LOC100799566 LOC101258795 LOC4334232 LOC100194052 LOC103859780 LOC103869510 LOC100243552 LOC7461186 LOC112327304 LOC25492682 LOC123122954 LOC123105144 LOC123452393 LOC107938847 LOC107908569 LOC106446853 LOC106444103 CHLRE_09g399589v5 LOC8083969 LOC102613458 LOC100830359 LOC107808155 LOC107778217
Function* clast3-like protein proteasome assembly chaperone 2 proteasome assembly chaperone 2 uncharacterized LOC101258795 uncharacterized LOC4334232 uncharacterized LOC100194052 proteasome assembly chaperone 2 proteasome assembly chaperone 2 uncharacterized LOC100243552 uncharacterized LOC7461186 uncharacterized LOC112327304 proteasome assembly chaperone 2 proteasome assembly chaperone 2 proteasome assembly chaperone 2 proteasome assembly chaperone 2 proteasome assembly chaperone 2 proteasome assembly chaperone 2 proteasome assembly chaperone 2 proteasome assembly chaperone 2 uncharacterized protein proteasome assembly chaperone 2 uncharacterized LOC102613458 proteasome assembly chaperone 2 uncharacterized LOC107808155 uncharacterized LOC107778217
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 14
osa04141 Protein processing in endoplasmic reticulum 4
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 11
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 13
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu03013 Nucleocytoplasmic transport 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit03008 Ribosome biogenesis in eukaryotes 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03013 Nucleocytoplasmic transport 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 4
bdi03015 mRNA surveillance pathway 4
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta03050 Proteasome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821426 100812348 100799566 101258795 4334232 100194052 103859780 103869510 100243552 7461186 112327304 25492682 123122954 123105144 123452393 107938847 107908569 106446853 106444103 5720400 8083969 102613458 100830359 107808155 107778217
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