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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939450   zinc finger CCCH domain-containing protein 22 
 ghi-r.1   107891427   zinc finger CCCH domain-containing protein 53 
 ghi-r.1   107920227   zinc finger CCCH domain-containing protein 23 
 ghi-r.1   107933303   zinc finger CCCH domain-containing protein 46 
 ath-u.5   AT3G51950   Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein 
 ath-u.5   AT3G63450   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103863500   zinc finger CCCH domain-containing protein 46 
 bra-r.6   103860736   zinc finger CCCH domain-containing protein 46 
 bra-r.6   103841132   zinc finger CCCH domain-containing protein 46 
 bna-r.1   111197830   zinc finger CCCH domain-containing protein 46-like 
 bna-r.1   106448356   zinc finger CCCH domain-containing protein 46 
 bna-r.1   106402740   zinc finger CCCH domain-containing protein 46 
 cit-r.1   102613471   zinc finger CCCH domain-containing protein 53 
 cit-r.1   102617155   zinc finger CCCH domain-containing protein 53 
 gma-u.5   100797806   zinc finger CCCH domain-containing protein 53 
 gma-u.5   100801341   zinc finger CCCH domain-containing protein 53 
 gma-u.5   100801807   zinc finger CCCH domain-containing protein 53 
 vvi-u.5   100260228   zinc finger CCCH domain-containing protein 53 
 vvi-u.5   100251683   zinc finger CCCH domain-containing protein 53 
 ppo-u.5   7460208   zinc finger CCCH domain-containing protein 53 
 ppo-u.5   18094313   zinc finger CCCH domain-containing protein 22 
 ppo-u.5   7467380   zinc finger CCCH domain-containing protein 53 
 mtr-u.5   11440909   zinc finger CCCH domain-containing protein 53 
 mtr-u.5   25490433   zinc finger CCCH domain-containing protein 53 
 sly-u.5   ZAT6   zinc finger transcription factor 6 
 sly-u.5   ZAT12   zinc finger transcription factor 12 
 sly-u.5   101268348   zinc finger CCCH domain-containing protein 46 
 sot-r.1   102596190   zinc finger CCCH domain-containing protein 53 
 sot-r.1   102590180   zinc finger CCCH domain-containing protein 53 
 sot-r.1   102586367   zinc finger CCCH domain-containing protein 53 
 nta-r.1   107763476   zinc finger CCCH domain-containing protein 53-like 
 nta-r.1   107773546   zinc finger CCCH domain-containing protein 46 
 nta-r.1   107790291   zinc finger CCCH domain-containing protein 53 
 osa-u.5   4332722   zinc finger CCCH domain-containing protein 22-like 
 osa-u.5   4332723   zinc finger CCCH domain-containing protein 23-like 
 osa-u.5   4344312   zinc finger CCCH domain-containing protein 53-like 
 zma-u.5   100384253   uncharacterized LOC100384253 
 zma-u.5   100383572   uncharacterized LOC100383572 
 tae-r.2   123091576   zinc finger CCCH domain-containing protein 53 
 tae-r.2   123051531   zinc finger CCCH domain-containing protein 53 
 tae-r.2   123096528   zinc finger CCCH domain-containing protein 53 
 hvu-r.1   123452367   zinc finger CCCH domain-containing protein 23-like 
 hvu-r.1   123424690   zinc finger CCCH domain-containing protein 53-like 
 hvu-r.1   123448104   zinc finger CCCH domain-containing protein 23-like 
 sbi-r.1   8083034   zinc finger CCCH domain-containing protein 53 
 sbi-r.1   8067145   zinc finger CCCH domain-containing protein 23 
 sbi-r.1   8078571   zinc finger CCCH domain-containing protein 53 
 bdi-r.1   100823213   zinc finger CCCH domain-containing protein 53 
 bdi-r.1   100841499   zinc finger CCCH domain-containing protein 22 
 bdi-r.1   100826004   zinc finger CCCH domain-containing protein 53 

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Top 50 coexpressed genes to 107939450 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939450 (ghi-r.1 coexpression data)

CoexMap"107939450"


ghiLOC107939450 | Entrez gene ID : 107939450    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 2 3 3 3 3 2 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_040941798.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_040941798.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040941798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939450
ghi-r.1
for
107891427
ghi-r.1
for
107920227
ghi-r.1
for
107933303
ath-u.5
for
AT3G51950
ath-u.5
for
AT3G63450
bra-r.6
for
103863500
bra-r.6
for
103860736
bra-r.6
for
103841132
bna-r.1
for
111197830
bna-r.1
for
106448356
bna-r.1
for
106402740
cit-r.1
for
102613471
cit-r.1
for
102617155
gma-u.5
for
100797806
gma-u.5
for
100801341
gma-u.5
for
100801807
vvi-u.5
for
100260228
vvi-u.5
for
100251683
ppo-u.5
for
7460208
ppo-u.5
for
18094313
ppo-u.5
for
7467380
mtr-u.5
for
11440909
mtr-u.5
for
25490433
sly-u.5
for
ZAT6
sly-u.5
for
ZAT12
sly-u.5
for
101268348
sot-r.1
for
102596190
sot-r.1
for
102590180
sot-r.1
for
102586367
nta-r.1
for
107763476
nta-r.1
for
107773546
nta-r.1
for
107790291
osa-u.5
for
4332722
osa-u.5
for
4332723
osa-u.5
for
4344312
zma-u.5
for
100384253
zma-u.5
for
100383572
tae-r.2
for
123091576
tae-r.2
for
123051531
tae-r.2
for
123096528
hvu-r.1
for
123452367
hvu-r.1
for
123424690
hvu-r.1
for
123448104
sbi-r.1
for
8083034
sbi-r.1
for
8067145
sbi-r.1
for
8078571
bdi-r.1
for
100823213
bdi-r.1
for
100841499
bdi-r.1
for
100826004


Ortholog ID: 1466
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107939450 LOC107920227 LOC107933303 AT3G51950 AT3G63450 LOC103863500 LOC103860736 LOC103841132 LOC111197830 LOC106402740 LOC106445658 LOC102613471 LOC102617155 LOC100801341 LOC100801807 LOC100804623 LOC100260228 LOC100251683 LOC7460208 LOC18094313 LOC7467380 LOC11440909 LOC25490433 LOC101268348 LOC101268764 LOC101253233 LOC102596190 LOC102590180 LOC102586367 LOC107763476 LOC107773546 LOC107831892 LOC4332722 LOC4332723 LOC4344312 LOC100192560 LOC100191777 LOC103646256 LOC123051531 LOC123120409 LOC123043658 LOC123452367 LOC123424690 LOC123448104 LOC8083034 LOC8067145 LOC8083677 LOC100841499 LOC100826004
Function* zinc finger CCCH domain-containing protein 22 zinc finger CCCH domain-containing protein 23 zinc finger CCCH domain-containing protein 46 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein RNA-binding (RRM/RBD/RNP motifs) family protein zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46-like zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46-like zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 22 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 22-like zinc finger CCCH domain-containing protein 23-like zinc finger CCCH domain-containing protein 53-like uncharacterized LOC100192560 putative RNA-binding zinc finger family protein zinc finger CCCH domain-containing protein 22 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 23-like zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 23-like zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 23 zinc finger CCCH domain-containing protein 22 zinc finger CCCH domain-containing protein 22 zinc finger CCCH domain-containing protein 53
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03082 ATP-dependent chromatin remodeling 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03015 mRNA surveillance pathway 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 4
sbi04517 IgSF CAM signaling 4
sbi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939450 107920227 107933303 824358 825520 103863500 103860736 103841132 111197830 106402740 106445658 102613471 102617155 100801341 100801807 100804623 100260228 100251683 7460208 18094313 7467380 11440909 25490433 101268348 101268764 101253233 102596190 102590180 102586367 107763476 107773546 107831892 4332722 4332723 4344312 100192560 100191777 103646256 123051531 123120409 123043658 123452367 123424690 123448104 8083034 8067145 8083677 100841499 100826004
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