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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25490433   zinc finger CCCH domain-containing protein 53 
 mtr-r.5   25490433   zinc finger CCCH domain-containing protein 53 
 mtr-u.5   11440909   zinc finger CCCH domain-containing protein 53 
 gma-u.5   100804623   zinc finger CCCH domain-containing protein 53 
 gma-u.5   100801807   zinc finger CCCH domain-containing protein 53 
 gma-u.5   100801341   zinc finger CCCH domain-containing protein 53 
 ppo-u.5   7467380   zinc finger CCCH domain-containing protein 53 
 ppo-u.5   7460208   zinc finger CCCH domain-containing protein 53 
 ppo-u.5   18094313   zinc finger CCCH domain-containing protein 22 
 ath-u.5   AT3G51950   Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein 
 ath-u.5   AT3G63450   RNA-binding (RRM/RBD/RNP motifs) family protein 
 vvi-u.5   100251683   zinc finger CCCH domain-containing protein 53 
 vvi-u.5   100260228   zinc finger CCCH domain-containing protein 53 
 sly-u.5   101253233   zinc finger CCCH domain-containing protein 53-like 
 sly-u.5   ZAT6   zinc finger transcription factor 6 
 sly-u.5   ZAT12   zinc finger transcription factor 12 
 osa-u.5   4344312   zinc finger CCCH domain-containing protein 53-like 
 osa-u.5   4332723   zinc finger CCCH domain-containing protein 23-like 
 osa-u.5   4332722   zinc finger CCCH domain-containing protein 22-like 
 zma-u.5   103646256   zinc finger CCCH domain-containing protein 22 
 zma-u.5   103654303   zinc finger CCCH domain-containing protein 53 

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Top 50 coexpressed genes to 25490433 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25490433 (mtr-u.5 coexpression data)

CoexMap"25490433"


mtrLOC25490433 | Entrez gene ID : 25490433      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 3 2 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2334 genes)  IEA  
Protein XP_013459312.1 [sequence] [blastp]
XP_024636042.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013459312.1)
nucl 9  (predict for XP_024636042.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013459312.1)
other 9  (predict for XP_024636042.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25490433
mtr-r.5
for
25490433
mtr-u.5
for
11440909
gma-u.5
for
100804623
gma-u.5
for
100801807
gma-u.5
for
100801341
ppo-u.5
for
7467380
ppo-u.5
for
7460208
ppo-u.5
for
18094313
ath-u.5
for
AT3G51950
ath-u.5
for
AT3G63450
vvi-u.5
for
100251683
vvi-u.5
for
100260228
sly-u.5
for
101253233
sly-u.5
for
ZAT6
sly-u.5
for
ZAT12
osa-u.5
for
4344312
osa-u.5
for
4332723
osa-u.5
for
4332722
zma-u.5
for
103646256
zma-u.5
for
103654303


Ortholog ID: 1466
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi
Symbol LOC25490433 LOC11440909 LOC100801807 LOC100804623 LOC7460208 LOC7467380 AT3G51950 AT3G63450 LOC103860736 LOC103841132 LOC100251683 LOC100260228 LOC107920227 LOC107933303 LOC106445658 LOC111197830 LOC102617155 LOC102613471 LOC101268764 LOC101253233 LOC102596190 LOC102590180 LOC107763476 LOC107831892 LOC4332722 LOC4332723 LOC100191777 LOC103646256 LOC123051531 LOC123120409 LOC123448104 LOC123424690 LOC8067145 LOC8083034 LOC100841499
Function* zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein RNA-binding (RRM/RBD/RNP motifs) family protein zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 23 zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 46-like zinc finger CCCH domain-containing protein 46-like zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 46 zinc finger CCCH domain-containing protein 22-like zinc finger CCCH domain-containing protein 23-like putative RNA-binding zinc finger family protein zinc finger CCCH domain-containing protein 22 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 23-like zinc finger CCCH domain-containing protein 53-like zinc finger CCCH domain-containing protein 23 zinc finger CCCH domain-containing protein 53 zinc finger CCCH domain-containing protein 22
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03082 ATP-dependent chromatin remodeling 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03015 mRNA surveillance pathway 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 4
sbi04517 IgSF CAM signaling 4
sbi04814 Motor proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25490433 11440909 100801807 100804623 7460208 7467380 824358 825520 103860736 103841132 100251683 100260228 107920227 107933303 106445658 111197830 102617155 102613471 101268764 101253233 102596190 102590180 107763476 107831892 4332722 4332723 100191777 103646256 123051531 123120409 123448104 123424690 8067145 8083034 100841499
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