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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939777   39S ribosomal protein L47, mitochondrial 
 ghi-r.1   107939277   39S ribosomal protein L47, mitochondrial 
 ath-u.5   AT1G07830   ribosomal protein L29 family protein 
 bra-r.6   103871527   39S ribosomal protein L47, mitochondrial 
 bra-r.6   103843432   39S ribosomal protein L47, mitochondrial 
 bna-r.1   106397506   39S ribosomal protein L47, mitochondrial 
 bna-r.1   106419833   39S ribosomal protein L47, mitochondrial 
 bna-r.1   106346381   39S ribosomal protein L47, mitochondrial-like 
 cit-r.1   102607350   uncharacterized LOC102607350 
 gma-u.5   100812176   39S ribosomal protein L47, mitochondrial-like 
 gma-u.5   100500208   ribosomal protein L29 
 vvi-u.5   100248410   uncharacterized LOC100248410 
 ppo-u.5   7487772   uncharacterized LOC7487772 
 ppo-u.5   7486835   uncharacterized LOC7486835 
 mtr-u.5   11419717   39S ribosomal protein L47, mitochondrial 
 sly-u.5   101252970   uncharacterized LOC101252970 
 sot-r.1   102587684   39S ribosomal protein L47, mitochondrial 
 nta-r.1   107791991   uncharacterized LOC107791991 
 nta-r.1   107810715   uncharacterized LOC107810715 
 osa-u.5   4339986   uncharacterized LOC4339986 
 zma-u.5   100281274   39S ribosomal protein L47 
 tae-r.2   123168165   39S ribosomal protein L47, mitochondrial 
 tae-r.2   123152236   39S ribosomal protein L47, mitochondrial 
 tae-r.2   123088245   39S ribosomal protein L47, mitochondrial 
 hvu-r.1   123409797   39S ribosomal protein L47, mitochondrial 
 sbi-r.1   8069044   39S ribosomal protein L47, mitochondrial 
 bdi-r.1   100823602   39S ribosomal protein L47, mitochondrial 

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Top 50 coexpressed genes to 107939777 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939777 (ghi-r.1 coexpression data)

CoexMap"107939777"


ghiLOC107939777 | Entrez gene ID : 107939777    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (58 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO:0005761 [list] [network] mitochondrial ribosome  (76 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016728639.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1  (predict for XP_016728639.1)
Subcellular
localization
TargetP
mito 6,  scret 4  (predict for XP_016728639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939777
ghi-r.1
for
107939277
ath-u.5
for
AT1G07830
bra-r.6
for
103871527
bra-r.6
for
103843432
bna-r.1
for
106397506
bna-r.1
for
106419833
bna-r.1
for
106346381
cit-r.1
for
102607350
gma-u.5
for
100812176
gma-u.5
for
100500208
vvi-u.5
for
100248410
ppo-u.5
for
7487772
ppo-u.5
for
7486835
mtr-u.5
for
11419717
sly-u.5
for
101252970
sot-r.1
for
102587684
nta-r.1
for
107791991
nta-r.1
for
107810715
osa-u.5
for
4339986
zma-u.5
for
100281274
tae-r.2
for
123168165
tae-r.2
for
123152236
tae-r.2
for
123088245
hvu-r.1
for
123409797
sbi-r.1
for
8069044
bdi-r.1
for
100823602


Ortholog ID: 8221
Species ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107939777 LOC107939277 AT1G07830 LOC103871527 LOC103843432 LOC106397506 LOC106419833 LOC106346381 LOC102607350 LOC100812176 LOC100500208 LOC100248410 LOC7487772 LOC7486835 LOC11419717 LOC101252970 LOC102587684 LOC107791991 LOC107810715 LOC4339986 LOC100281274 LOC123152236 LOC123088245 LOC123068710 LOC123409797 LOC8069044 LOC100823602
Function* 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial ribosomal protein L29 family protein 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial-like uncharacterized LOC102607350 39S ribosomal protein L47, mitochondrial-like ribosomal protein L29 uncharacterized LOC100248410 uncharacterized LOC7487772 uncharacterized LOC7486835 39S ribosomal protein L47, mitochondrial uncharacterized LOC101252970 39S ribosomal protein L47, mitochondrial uncharacterized LOC107791991 uncharacterized LOC107810715 uncharacterized LOC4339986 39S ribosomal protein L47 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00020 Citrate cycle (TCA cycle) 5
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi03010 Ribosome 3
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly03018 RNA degradation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae04120 Ubiquitin mediated proteolysis 3
tae00020 Citrate cycle (TCA cycle) 2
tae00270 Cysteine and methionine metabolism 2
tae00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939777 107939277 837298 103871527 103843432 106397506 106419833 106346381 102607350 100812176 100500208 100248410 7487772 7486835 11419717 101252970 102587684 107791991 107810715 4339986 100281274 123152236 123088245 123068710 123409797 8069044 100823602
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