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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8069044   39S ribosomal protein L47, mitochondrial 
 zma-u.5   100281274   39S ribosomal protein L47 
 osa-u.5   4339986   uncharacterized LOC4339986 
 ath-u.5   AT1G07830   ribosomal protein L29 family protein 
 gma-u.5   100812176   39S ribosomal protein L47, mitochondrial-like 
 gma-u.5   100500208   ribosomal protein L29 
 sly-u.5   101252970   uncharacterized LOC101252970 
 vvi-u.5   100248410   uncharacterized LOC100248410 
 ppo-u.5   7487772   uncharacterized LOC7487772 
 ppo-u.5   7486835   uncharacterized LOC7486835 
 mtr-u.5   11419717   39S ribosomal protein L47, mitochondrial 

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Top 50 coexpressed genes to 8069044 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8069044 (sbi-r.1 coexpression data)

CoexMap"8069044"


sbiLOC8069044 | Entrez gene ID : 8069044      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (18 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (19 genes)  IEA  
GO:0005761 [list] [network] mitochondrial ribosome  (28 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002436394.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 2  (predict for XP_002436394.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002436394.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8069044

.
zma-u.5
for
100281274

.
osa-u.5
for
4339986

.
ath-u.5
for
AT1G07830

.
gma-u.5
for
100812176

.
gma-u.5
for
100500208

.
sly-u.5
for
101252970

.
vvi-u.5
for
100248410

.
ppo-u.5
for
7487772

.
ppo-u.5
for
7486835

.
mtr-u.5
for
11419717

.


Ortholog ID: 8221
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G07830 LOC100812176 LOC100500208 LOC101252970 LOC4339986 LOC100281274 LOC103871527 LOC103843432 LOC100248410 LOC7487772 LOC7486835 LOC11419717 LOC123068710 LOC123152236 LOC123409797 LOC107939777 LOC107939277 LOC106397506 LOC106419833 LOC8069044 LOC102587684 LOC102607350 LOC100823602 LOC107791991 LOC107810715
Function* ribosomal protein L29 family protein 39S ribosomal protein L47, mitochondrial-like ribosomal protein L29 uncharacterized LOC101252970 uncharacterized LOC4339986 39S ribosomal protein L47 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial uncharacterized LOC100248410 uncharacterized LOC7487772 uncharacterized LOC7486835 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial 39S ribosomal protein L47, mitochondrial uncharacterized LOC102607350 39S ribosomal protein L47, mitochondrial uncharacterized LOC107791991 uncharacterized LOC107810715
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly03018 RNA degradation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 6
vvi00020 Citrate cycle (TCA cycle) 5
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi03010 Ribosome 3
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae04120 Ubiquitin mediated proteolysis 3
tae00020 Citrate cycle (TCA cycle) 2
tae00270 Cysteine and methionine metabolism 2
tae00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03010 Ribosome 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837298 100812176 100500208 101252970 4339986 100281274 103871527 103843432 100248410 7487772 7486835 11419717 123068710 123152236 123409797 107939777 107939277 106397506 106419833 8069044 102587684 102607350 100823602 107791991 107810715
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