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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939791   50S ribosomal protein L7/L12 
 ath-u.5   AT3G06040   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 
 gma-u.5   100816926   50S ribosomal protein L7/L12 
 gma-u.5   100306392   50S ribosomal protein L7/L12-like 
 vvi-u.5   100246777   uncharacterized LOC100246777 
 ppo-u.5   7457740   uncharacterized LOC7457740 
 mtr-u.5   25486332   50S ribosomal protein L7/L12 
 sly-u.5   101248704   uncharacterized LOC101248704 
 osa-u.5   4328635   uncharacterized LOC4328635 
 zma-u.5   100192505   50S ribosomal protein L7/L12-like 
 zma-u.5   100216725   Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 

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Top 50 coexpressed genes to 107939791 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939791 (ghi-r.1 coexpression data)

CoexMap"107939791"


ghiLOC107939791 | Entrez gene ID : 107939791    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016728653.1 [sequence] [blastp]
XP_016728654.1 [sequence] [blastp]
XP_016728655.1 [sequence] [blastp]
XP_016728656.1 [sequence] [blastp]
XP_016728657.1 [sequence] [blastp]
XP_016728658.1 [sequence] [blastp]
XP_040963764.1 [sequence] [blastp]
XP_040963765.1 [sequence] [blastp]
XP_040963766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_016728653.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_016728654.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_016728655.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_016728656.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_016728657.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_016728658.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_040963764.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_040963765.1)
chlo 4,  chlo_mito 4,  mito 3,  cyto 2  (predict for XP_040963766.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016728653.1)
mito 7  (predict for XP_016728654.1)
mito 7  (predict for XP_016728655.1)
mito 7  (predict for XP_016728656.1)
mito 7  (predict for XP_016728657.1)
mito 7  (predict for XP_016728658.1)
mito 7  (predict for XP_040963764.1)
mito 7  (predict for XP_040963765.1)
mito 7  (predict for XP_040963766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939791
ath-u.5
for
AT3G06040
gma-u.5
for
100816926
gma-u.5
for
100306392
vvi-u.5
for
100246777
ppo-u.5
for
7457740
mtr-u.5
for
25486332
sly-u.5
for
101248704
osa-u.5
for
4328635
zma-u.5
for
100192505
zma-u.5
for
100216725


Ortholog ID: 9451
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107939791 LOC107939288 AT3G06040 LOC103854447 LOC106386449 LOC106400581 LOC102608536 LOC100816926 LOC100306392 LOC100246777 LOC7457740 LOC25486332 LOC101248704 LOC102598332 LOC107773238 LOC4328635 LOC100216725 LOC100192505 LOC123136688 LOC123132613 LOC123402103 LOC8082909 LOC100839005
Function* 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 uncharacterized LOC102608536 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12-like uncharacterized LOC100246777 uncharacterized LOC7457740 50S ribosomal protein L7/L12 uncharacterized LOC101248704 50S ribosomal protein L7/L12 uncharacterized LOC107773238 uncharacterized LOC4328635 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 50S ribosomal protein L7/L12-like 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 50S ribosomal protein L12, chloroplastic 50S ribosomal protein L7/L12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 2
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
zma00500 Starch and sucrose metabolism 2
zma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi00230 Purine metabolism 2
sbi01232 Nucleotide metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939791 107939288 819777 103854447 106386449 106400581 102608536 100816926 100306392 100246777 7457740 25486332 101248704 102598332 107773238 4328635 100216725 100192505 123136688 123132613 123402103 8082909 100839005
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