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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939885   probable enoyl-CoA hydratase 2, mitochondrial 
 ath-u.5   AT4G16800   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 gma-u.5   100526933   crotonase/enoyl-coenzyme A hydratase superfamily 
 gma-u.5   100306241   probable enoyl-CoA hydratase 2, mitochondrial 
 vvi-u.5   100259474   probable enoyl-CoA hydratase 2, mitochondrial 
 ppo-u.5   18096880   probable enoyl-CoA hydratase 2, mitochondrial 
 ppo-u.5   18094577   probable enoyl-CoA hydratase 2, mitochondrial 
 mtr-u.5   11406894   probable enoyl-CoA hydratase 2, mitochondrial 
 sly-u.5   101243918   crotonase/enoyl-coenzyme A (CoA) hydratase superfamily 
 osa-u.5   4330183   probable enoyl-CoA hydratase 2, mitochondrial 
 osa-u.5   4330184   probable enoyl-CoA hydratase 2, mitochondrial 
 zma-u.5   100284299   methylglutaconyl-CoA hydratase 
 zma-u.5   100193367   uncharacterized LOC100193367 

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Top 50 coexpressed genes to 107939885 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939885 (ghi-r.1 coexpression data)

CoexMap"107939885"


ghiLOC107939885 | Entrez gene ID : 107939885    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00280 [list] [network] Valine, leucine and isoleucine degradation (115 genes)
GO BP
GO:0006635 [list] [network] fatty acid beta-oxidation  (81 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0003824 [list] [network] catalytic activity  (20761 genes)  IEA  
Protein XP_016728758.2 [sequence] [blastp]
XP_040939380.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_016728758.2)
mito 6,  chlo 4  (predict for XP_040939380.1)
Subcellular
localization
TargetP
chlo 5,  mito 5  (predict for XP_016728758.2)
chlo 5,  mito 5  (predict for XP_040939380.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939885
ath-u.5
for
AT4G16800
gma-u.5
for
100526933
gma-u.5
for
100306241
vvi-u.5
for
100259474
ppo-u.5
for
18096880
ppo-u.5
for
18094577
mtr-u.5
for
11406894
sly-u.5
for
101243918
osa-u.5
for
4330183
osa-u.5
for
4330184
zma-u.5
for
100284299
zma-u.5
for
100193367


Ortholog ID: 6608
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi cre cre
Symbol LOC107939885 LOC121224309 AT4G16800 LOC103833979 LOC106411580 LOC125575133 LOC102616294 LOC100306241 LOC100526933 LOC100259474 LOC18096880 LOC18094577 LOC11406894 LOC101243918 LOC102597786 LOC107760662 LOC107816158 LOC4330183 LOC4330184 LOC100193367 LOC100284299 LOC123144979 LOC123144980 LOC123401641 LOC8073969 LOC8073970 LOC100843164 CHLRE_02g091850v5 CHLRE_03g190850v5
Function* probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial ATP-dependent caseinolytic (Clp) protease/crotonase family protein probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial crotonase/enoyl-coenzyme A hydratase superfamily probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial crotonase/enoyl-coenzyme A (CoA) hydratase superfamily putative enoyl-CoA hydratase/isomerase YngF putative enoyl-CoA hydratase 2, mitochondrial putative enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial uncharacterized LOC100193367 methylglutaconyl-CoA hydratase probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ghi01230 Biosynthesis of amino acids 4
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ghi01230 Biosynthesis of amino acids 4
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00561 Glycerolipid metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00071 Fatty acid degradation 5
bna00592 alpha-Linolenic acid metabolism 5
bna01212 Fatty acid metabolism 5
bna00240 Pyrimidine metabolism 3
bna00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00071 Fatty acid degradation 4
bna00592 alpha-Linolenic acid metabolism 4
bna01212 Fatty acid metabolism 4
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit03030 DNA replication 2
cit03410 Base excision repair 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
gma00270 Cysteine and methionine metabolism 2
gma00380 Tryptophan metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
gma00270 Cysteine and methionine metabolism 2
gma00380 Tryptophan metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 4
sly04016 MAPK signaling pathway - plant 2
sly00650 Butanoate metabolism 2
sly01200 Carbon metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 8
sot01200 Carbon metabolism 4
sot00310 Lysine degradation 3
sot00410 beta-Alanine metabolism 3
sot00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00620 Pyruvate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00071 Fatty acid degradation 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 10
osa01210 2-Oxocarboxylic acid metabolism 4
osa00650 Butanoate metabolism 3
osa01200 Carbon metabolism 3
osa00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma00511 Other glycan degradation 2
zma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 4
zma01200 Carbon metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00071 Fatty acid degradation 2
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 16
tae00310 Lysine degradation 5
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00030 Pentose phosphate pathway 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 8
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
hvu01212 Fatty acid metabolism 2
hvu00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 6
sbi01210 2-Oxocarboxylic acid metabolism 4
sbi00640 Propanoate metabolism 3
sbi00785 Lipoic acid metabolism 3
sbi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 5
bdi00330 Arginine and proline metabolism 3
bdi00410 beta-Alanine metabolism 3
bdi00640 Propanoate metabolism 2
bdi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939885 121224309 827386 103833979 106411580 125575133 102616294 100306241 100526933 100259474 18096880 18094577 11406894 101243918 102597786 107760662 107816158 4330183 4330184 100193367 100284299 123144979 123144980 123401641 8073969 8073970 100843164 5727491 5717529
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