ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107943246	60S ribosomal protein L34
ath-u.5	AT3G28900	Ribosomal protein L34e superfamily protein
ath-u.5	AT1G26880	Ribosomal protein L34e superfamily protein
ath-u.5	RPL34	ribosomal protein L34
gma-u.5	100785061	60S ribosomal protein L34
gma-u.5	100499882	uncharacterized LOC100499882
gma-u.5	100305798	uncharacterized LOC100305798
vvi-u.5	100241433	large ribosomal subunit protein eL34
vvi-u.5	100252617	large ribosomal subunit protein eL34
ppo-u.5	7484340	60S ribosomal protein L34
ppo-u.5	112326175	60S ribosomal protein L34
ppo-u.5	7495969	60S ribosomal protein L34
mtr-u.5	11408889	60S ribosomal protein L34
mtr-u.5	25502702	60S ribosomal protein L34
mtr-u.5	11429919	60S ribosomal protein L34
sly-u.5	101266720	large ribosomal subunit protein eL34
sly-u.5	101254152	large ribosomal subunit protein eL34
sly-u.5	101253597	large ribosomal subunit protein eL34
osa-u.5	9267671	large ribosomal subunit protein eL34
osa-u.5	4345669	large ribosomal subunit protein eL34
osa-u.5	4344696	large ribosomal subunit protein eL34
zma-u.5	100286075	60S ribosomal protein L34
zma-u.5	100285578	60S ribosomal protein L34
zma-u.5	100193910	60S ribosomal protein L34

Annotation

functional annotation

KEGG

ghi03010 [list] [network] Ribosome (2429 genes)

GO BP

GO:0042254 [list] [network] ribosome biogenesis	(752 genes)	IEA
GO:0006412 [list] [network] translation	(1487 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(467 genes)	IEA
GO:0005840 [list] [network] ribosome	(1110 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(1075 genes)

IEA

Protein

XP_016732482.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, mito 3

(predict for XP_016732482.2)

Subcellular
localization
TargetP

mito 8

(predict for XP_016732482.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107943246	ath-u.5 for AT3G28900	ath-u.5 for AT1G26880	ath-u.5 for RPL34	gma-u.5 for 100785061	gma-u.5 for 100499882	gma-u.5 for 100305798	vvi-u.5 for 100241433	vvi-u.5 for 100252617	ppo-u.5 for 7484340	ppo-u.5 for 112326175	ppo-u.5 for 7495969	mtr-u.5 for 11408889	mtr-u.5 for 25502702	mtr-u.5 for 11429919	sly-u.5 for 101266720	sly-u.5 for 101254152	sly-u.5 for 101253597	osa-u.5 for 9267671	osa-u.5 for 4345669	osa-u.5 for 4344696	zma-u.5 for 100286075	zma-u.5 for 100285578	zma-u.5 for 100193910

Ortholog

Ortholog ID: 1111

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

RPL34

Function^*

60S ribosomal protein L34

ribosomal protein L34

Ribosomal protein L34e superfamily protein

60S ribosomal protein L34-2

60S ribosomal protein L34-1

60S ribosomal protein L34-2-like

60S ribosomal protein L34

uncharacterized LOC100305798

60S ribosomal protein L34

large ribosomal subunit protein eL34

60S ribosomal protein L34

large ribosomal subunit protein eL34

60S ribosomal protein L34-like

large ribosomal subunit protein eL34-like

large ribosomal subunit protein eL34

60S ribosomal protein L34

ribosomal protein L34

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14
ghi03040	Spliceosome	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	3
nta03420	Nucleotide excision repair	3
nta03040	Spliceosome	3
nta03010	Ribosome	3
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13
tae03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	18
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	18

Expression

Expression pattern

Entrez Gene ID^*

107886864

107946513

843298

838331

103831364

106379530

106402071

102618065

100305798

100785061

100241433

100252617

18105866

112326175

11429919

25502702

101254152

101266720

102605171

107771505

107768952

4345669

4344696

100217171

100193910

123165465

123045663

123426913

123398291

8077830

8076595

100840028

5723498

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107943246 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107943246 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	3	3	2	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107943246 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107943246 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**