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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107943994   protein transport protein Sec24-like At4g32640 
 ghi-r.1   107962524   protein transport protein Sec24-like At4g32640 
 ghi-r.1   107924048   protein transport protein Sec24-like At4g32640 
 ghi-r.1   107901421   protein transport protein Sec24-like At4g32640 
 ath-u.5   CEF   uncharacterized protein 
 ath-u.5   AT4G32640   Sec23/Sec24 protein transport family protein 
 bra-r.6   103850674   protein transport protein Sec24-like At4g32640 
 bra-r.6   103848077   protein transport protein Sec24-like CEF 
 bna-r.1   106410638   protein transport protein Sec24-like At4g32640 
 bna-r.1   111210294   protein transport protein Sec24-like CEF 
 bna-r.1   106347681   protein transport protein Sec24-like CEF 
 cit-r.1   102609457   protein transport protein Sec24-like At4g32640 
 gma-u.5   100813263   protein transport protein Sec24-like At4g32640 
 gma-u.5   100797752   protein transport protein Sec24-like At4g32640 
 vvi-u.5   100265768   protein transport protein SEC24 C 
 ppo-u.5   18110981   protein transport protein Sec24-like At4g32640 
 ppo-u.5   18098930   protein transport protein Sec24-like At4g32640 
 mtr-u.5   25485594   protein transport protein Sec24-like At4g32640 
 sly-u.5   101260822   protein transport protein SEC24 C-like 
 sly-u.5   101253501   protein transport protein SEC24 B-like 
 sot-r.1   102597069   protein transport protein Sec24-like At4g32640 
 sot-r.1   102595564   protein transport protein Sec24-like CEF 
 nta-r.1   107827176   protein transport protein SEC24 B-like 
 nta-r.1   107787821   protein transport protein SEC24 C 
 nta-r.1   107801078   protein transport protein SEC24 C-like 
 osa-u.5   4350517   protein transport protein SEC24 B 
 osa-u.5   4352115   protein transport protein SEC24 B 
 zma-u.5   103646939   protein transport protein Sec24-like CEF 
 zma-u.5   100382471   Protein transport protein Sec24-like CEF 
 tae-r.2   123086545   protein transport protein Sec24-like CEF 
 tae-r.2   123096354   protein transport protein Sec24-like CEF 
 tae-r.2   123102750   protein transport protein Sec24-like CEF 
 hvu-r.1   123447882   protein transport protein Sec24-like CEF 
 sbi-r.1   8075772   protein transport protein Sec24-like CEF 
 bdi-r.1   100821842   protein transport protein Sec24-like CEF 
 bdi-r.1   100824425   protein transport protein Sec24-like CEF 
 cre-r.1   CHLRE_01g035850v5   uncharacterized protein 

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Top 50 coexpressed genes to 107943994 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107943994 (ghi-r.1 coexpression data)

CoexMap"107943994"


ghiLOC107943994 | Entrez gene ID : 107943994    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 2 1 2 1 2 2 3 2 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
GO BP
GO:0090110 [list] [network] COPII-coated vesicle cargo loading  (42 genes)  IEA  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (272 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (804 genes)  IEA  
GO CC
GO:0030127 [list] [network] COPII vesicle coat  (61 genes)  IEA  
GO:0070971 [list] [network] endoplasmic reticulum exit site  (64 genes)  IEA  
GO MF
GO:0000149 [list] [network] SNARE binding  (209 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_040969994.1 [sequence] [blastp]
XP_040969995.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for XP_040969994.1)
chlo 7,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for XP_040969995.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_040969994.1)
chlo 8  (predict for XP_040969995.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107943994
ghi-r.1
for
107962524
ghi-r.1
for
107924048
ghi-r.1
for
107901421
ath-u.5
for
CEF
ath-u.5
for
AT4G32640
bra-r.6
for
103850674
bra-r.6
for
103848077
bna-r.1
for
106410638
bna-r.1
for
111210294
bna-r.1
for
106347681
cit-r.1
for
102609457
gma-u.5
for
100813263
gma-u.5
for
100797752
vvi-u.5
for
100265768
ppo-u.5
for
18110981
ppo-u.5
for
18098930
mtr-u.5
for
25485594
sly-u.5
for
101260822
sly-u.5
for
101253501
sot-r.1
for
102597069
sot-r.1
for
102595564
nta-r.1
for
107827176
nta-r.1
for
107787821
nta-r.1
for
107801078
osa-u.5
for
4350517
osa-u.5
for
4352115
zma-u.5
for
103646939
zma-u.5
for
100382471
tae-r.2
for
123086545
tae-r.2
for
123096354
tae-r.2
for
123102750
hvu-r.1
for
123447882
sbi-r.1
for
8075772
bdi-r.1
for
100821842
bdi-r.1
for
100824425
cre-r.1
for
CHLRE_01g035850v5


Ortholog ID: 4570
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107943994 LOC107962524 LOC107924048 CEF AT4G32640 LOC103850674 LOC103848077 LOC106410638 LOC111210294 LOC106347681 LOC102609457 LOC100813263 LOC100797752 LOC100265768 LOC18110981 LOC18098930 LOC25485594 LOC101260822 LOC101253501 LOC102597069 LOC102595564 LOC107827176 LOC107787821 LOC107762318 LOC4350517 LOC4352115 LOC103646939 LOC100382471 LOC123096354 LOC123102750 LOC123110932 LOC123447882 LOC8075772 LOC100821842 LOC100824425 CHLRE_01g035850v5
Function* protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like At4g32640 uncharacterized protein Sec23/Sec24 protein transport family protein protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like CEF protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like At4g32640 protein transport protein SEC24 C protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like At4g32640 protein transport protein SEC24 C-like protein transport protein SEC24 B-like protein transport protein Sec24-like At4g32640 protein transport protein Sec24-like CEF protein transport protein SEC24 B-like protein transport protein SEC24 C protein transport protein SEC24 C protein transport protein SEC24 B protein transport protein SEC24 B protein transport protein Sec24-like CEF Protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF protein transport protein Sec24-like CEF uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 8
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 7
ath04142 Lysosome 3
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 6
bra04142 Lysosome 4
bra05100 Bacterial invasion of epithelial cells 4
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 8
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 3
bna04120 Ubiquitin mediated proteolysis 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04142 Lysosome 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma04144 Endocytosis 3
gma05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma04142 Lysosome 4
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 5
vvi04141 Protein processing in endoplasmic reticulum 3
vvi05100 Bacterial invasion of epithelial cells 3
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04144 Endocytosis 4
ppo04142 Lysosome 3
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr04144 Endocytosis 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly04142 Lysosome 3
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 7
sot04144 Endocytosis 4
sot05100 Bacterial invasion of epithelial cells 3
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 9
osa04145 Phagosome 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa04142 Lysosome 2
osa04144 Endocytosis 2
osa05100 Bacterial invasion of epithelial cells 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 8
zma03018 RNA degradation 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 8
zma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04142 Lysosome 3
tae04144 Endocytosis 3
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04142 Lysosome 3
sbi03013 Nucleocytoplasmic transport 3
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 6
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107943994 107962524 107924048 823559 829399 103850674 103848077 106410638 111210294 106347681 102609457 100813263 100797752 100265768 18110981 18098930 25485594 101260822 101253501 102597069 102595564 107827176 107787821 107762318 4350517 4352115 103646939 100382471 123096354 123102750 123110932 123447882 8075772 100821842 100824425 5715469
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