ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107946105	60S ribosomal protein L44
ath-u.5	AT3G23390	Zinc-binding ribosomal protein family protein
ath-u.5	AT4G14320	Zinc-binding ribosomal protein family protein
gma-u.5	100789419	60S ribosomal protein L44
gma-u.5	100795041	60S ribosomal protein L44
gma-u.5	100789948	60S ribosomal protein L44
vvi-u.5	100261906	large ribosomal subunit protein eL42
vvi-u.5	100259458	large ribosomal subunit protein eL42
vvi-u.5	104878992	large ribosomal subunit protein eL42
ppo-u.5	7466878	60S ribosomal protein L44
ppo-u.5	7455525	60S ribosomal protein L44
ppo-u.5	7456311	60S ribosomal protein L44
mtr-u.5	11424907	60S ribosomal protein L44
mtr-u.5	11433415	60S ribosomal protein L44
mtr-u.5	25493298	60S ribosomal protein L44
sly-u.5	101268875	large ribosomal subunit protein eL42
sly-u.5	101253271	large ribosomal subunit protein eL42
osa-u.5	9266960	large ribosomal subunit protein eL42
osa-u.5	4343416	large ribosomal subunit protein eL42
osa-u.5	9271813	large ribosomal subunit protein eL42
zma-u.5	100284825	60S ribosomal protein L44
zma-u.5	100280597	60S ribosomal protein L44
zma-u.5	103633242	60S ribosomal protein L36a

Annotation

functional annotation

KEGG

ghi03010 [list] [network] Ribosome (2429 genes)

GO BP

GO:0006412 [list] [network] translation

(1487 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(467 genes)	IEA
GO:0005840 [list] [network] ribosome	(1110 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(1075 genes)

IEA

Protein

XP_016735798.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1, plas 1, extr 1, cyto_plas 1

(predict for XP_016735798.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016735798.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107946105	ath-u.5 for AT3G23390	ath-u.5 for AT4G14320	gma-u.5 for 100789419	gma-u.5 for 100795041	gma-u.5 for 100789948	vvi-u.5 for 100261906	vvi-u.5 for 100259458	vvi-u.5 for 104878992	ppo-u.5 for 7466878	ppo-u.5 for 7455525	ppo-u.5 for 7456311	mtr-u.5 for 11424907	mtr-u.5 for 11433415	mtr-u.5 for 25493298	sly-u.5 for 101268875	sly-u.5 for 101253271	osa-u.5 for 9266960	osa-u.5 for 4343416	osa-u.5 for 9271813	zma-u.5 for 100284825	zma-u.5 for 100280597	zma-u.5 for 103633242

Ortholog

Ortholog ID: 1109

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

60S ribosomal protein L44

60S ribosomal protein L44-like

Zinc-binding ribosomal protein family protein

60S ribosomal protein L36a

60S ribosomal protein L44

putative 60S ribosomal protein L36a

60S ribosomal protein L44

large ribosomal subunit protein eL42

60S ribosomal protein L44

large ribosomal subunit protein eL42

60S ribosomal protein L44

60S ribosomal protein L44-like

large ribosomal subunit protein eL42

60S ribosomal protein L44

60S ribosomal protein L36a

60S ribosomal protein L36a-like

60S ribosomal protein L36a

60S ribosomal protein L44

60S ribosomal protein L36a

ribosomal protein L36a;uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12
mtr03420	Nucleotide excision repair	4
mtr03030	DNA replication	2
mtr03430	Mismatch repair	2
mtr03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	13
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	17

Expression

Expression pattern

Entrez Gene ID^*

107894041

107886896

821920

827074

103828745

103860001

106439716

106397235

102626204

100305488

100795041

100261906

100259458

7455525

7456311

25493298

11424907

101268875

102589971

102604878

107802399

107767162

9271813

9266960

100280597

103633242

123104543

123044656

123425872

123452524

8080140

8080172

100844347

100843847

5716795

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107946105 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107946105 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	3	3	3	2	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107946105 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107946105 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**