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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948423   signal recognition particle 54 kDa protein, chloroplastic 
 ath-u.5   CPSRP54   chloroplast signal recognition particle 54 kDa subunit 
 gma-u.5   121174134   signal recognition particle 54 kDa protein, chloroplastic 
 gma-u.5   100782581   signal recognition particle 54 kDa protein, chloroplastic 
 vvi-u.5   100247624   signal recognition particle subunit SRP54, chloroplastic 
 ppo-u.5   7492249   signal recognition particle 54 kDa protein, chloroplastic 
 ppo-u.5   7465265   signal recognition particle 54 kDa protein, chloroplastic 
 mtr-u.5   11433065   signal recognition particle 54 kDa protein, chloroplastic 
 sly-u.5   101251215   signal recognition particle 54 kDa protein, chloroplastic 
 osa-u.5   4349809   signal recognition particle subunit SRP54, chloroplastic 
 osa-u.5   9267495   signal recognition particle subunit SRP54, chloroplastic 
 zma-u.5   103654352   signal recognition particle 54 kDa protein, chloroplastic 
 zma-u.5   100274153   uncharacterized LOC100274153 

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Top 50 coexpressed genes to 107948423 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948423 (ghi-r.1 coexpression data)

CoexMap"107948423"


ghiLOC107948423 | Entrez gene ID : 107948423    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03060 [list] [network] Protein export (151 genes)
GO BP
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (50 genes)  IEA  
GO CC
GO:0048500 [list] [network] signal recognition particle  (15 genes)  IEA  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (15 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (613 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (687 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
Protein XP_016738451.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_016738451.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016738451.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948423
ath-u.5
for
CPSRP54
gma-u.5
for
121174134
gma-u.5
for
100782581
vvi-u.5
for
100247624
ppo-u.5
for
7492249
ppo-u.5
for
7465265
mtr-u.5
for
11433065
sly-u.5
for
101251215
osa-u.5
for
4349809
osa-u.5
for
9267495
zma-u.5
for
103654352
zma-u.5
for
100274153


Ortholog ID: 5822
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107899247 LOC107948423 CPSRP54 LOC103850524 LOC103847347 LOC106372661 LOC106433860 LOC102618343 LOC121174134 LOC100782581 LOC100247624 LOC7465265 LOC7492249 LOC11433065 LOC101251215 LOC102600205 LOC107773874 LOC9267495 LOC4349809 LOC103654352 LOC100274153 LOC123091497 LOC123091498 LOC123448046 LOC123448047 LOC8058550 LOC8079832 LOC100827013 LOC112268680 CHLRE_11g479750v5
Function* signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic chloroplast signal recognition particle 54 kDa subunit signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle 54 kDa protein, chloroplastic uncharacterized LOC100274153 signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic-like signal recognition particle 54 kDa protein, chloroplastic-like signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic uncharacterized LOC112268680 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03060 Protein export 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 5
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 3
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 4
ppo01200 Carbon metabolism 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
mtr00052 Galactose metabolism 2
mtr00561 Glycerolipid metabolism 2
mtr00600 Sphingolipid metabolism 2
mtr00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03060 Protein export 3
sly00620 Pyruvate metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 2
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 8
cre01240 Biosynthesis of cofactors 4
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107899247 107948423 830273 103850524 103847347 106372661 106433860 102618343 121174134 100782581 100247624 7465265 7492249 11433065 101251215 102600205 107773874 9267495 4349809 103654352 100274153 123091497 123091498 123448046 123448047 8058550 8079832 100827013 112268680 5722916
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