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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7492249   signal recognition particle 54 kDa protein, chloroplastic 
 ppo-r.4   7492249   signal recognition particle 54 kDa protein, chloroplastic 
 ppo-u.5   7465265   signal recognition particle 54 kDa protein, chloroplastic 
 gma-u.5   121174134   signal recognition particle 54 kDa protein, chloroplastic 
 gma-u.5   100782581   signal recognition particle 54 kDa protein, chloroplastic 
 mtr-u.5   11433065   signal recognition particle 54 kDa protein, chloroplastic 
 ath-u.5   CPSRP54   chloroplast signal recognition particle 54 kDa subunit 
 vvi-u.5   100247624   signal recognition particle subunit SRP54, chloroplastic 
 sly-u.5   101251215   signal recognition particle 54 kDa protein, chloroplastic 
 osa-u.5   4349809   signal recognition particle subunit SRP54, chloroplastic 
 osa-u.5   9267495   signal recognition particle subunit SRP54, chloroplastic 
 zma-u.5   103654352   signal recognition particle 54 kDa protein, chloroplastic 
 zma-u.5   100274153   uncharacterized LOC100274153 

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Top 50 coexpressed genes to 7492249 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7492249 (ppo-u.5 coexpression data)

CoexMap"7492249"


ppoLOC7492249 | Entrez gene ID : 7492249    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03060 [list] [network] Protein export (78 genes)
GO BP
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (25 genes)  IEA  
GO CC
GO:0048500 [list] [network] signal recognition particle  (12 genes)  IEA  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (12 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
Protein XP_006381979.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_006381979.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006381979.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7492249

.
ppo-r.4
for
7492249

.
ppo-u.5
for
7465265

.
gma-u.5
for
121174134

.
gma-u.5
for
100782581

.
mtr-u.5
for
11433065

.
ath-u.5
for
CPSRP54

.
vvi-u.5
for
100247624

.
sly-u.5
for
101251215

.
osa-u.5
for
4349809

.
osa-u.5
for
9267495

.
zma-u.5
for
103654352

.
zma-u.5
for
100274153

.


Ortholog ID: 5822
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta
Symbol CPSRP54 LOC121174134 LOC100782581 LOC101251215 LOC9267495 LOC4349809 LOC103654352 LOC100274153 LOC103850524 LOC103847347 LOC100247624 LOC7465265 LOC7492249 LOC11433065 LOC123091497 LOC123091498 LOC123448046 LOC123448047 LOC107899247 LOC107948423 LOC106372661 LOC106433860 CHLRE_11g479750v5 LOC8058550 LOC8079832 LOC102600205 LOC102618343 LOC100827013 LOC112268680 LOC107773874
Function* chloroplast signal recognition particle 54 kDa subunit signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle 54 kDa protein, chloroplastic uncharacterized LOC100274153 signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle subunit SRP54, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic-like signal recognition particle 54 kDa protein, chloroplastic-like signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic uncharacterized protein signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic signal recognition particle 54 kDa protein, chloroplastic uncharacterized LOC112268680 signal recognition particle subunit SRP54, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03060 Protein export 3
sly00620 Pyruvate metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 5
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 3
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 4
ppo01200 Carbon metabolism 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
mtr00052 Galactose metabolism 2
mtr00561 Glycerolipid metabolism 2
mtr00600 Sphingolipid metabolism 2
mtr00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03060 Protein export 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 8
cre01240 Biosynthesis of cofactors 4
cre03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 2
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830273 121174134 100782581 101251215 9267495 4349809 103654352 100274153 103850524 103847347 100247624 7465265 7492249 11433065 123091497 123091498 123448046 123448047 107899247 107948423 106372661 106433860 5722916 8058550 8079832 102600205 102618343 100827013 112268680 107773874
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