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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948772   4-coumarate--CoA ligase-like 9 
 ath-u.5   AT5G63380   AMP-dependent synthetase and ligase family protein 
 gma-u.5   100804044   4-coumarate--CoA ligase-like 9 
 vvi-u.5   100266547   4-coumarate--CoA ligase-like 9 
 vvi-u.5   100268159   4-coumarate--CoA ligase-like 9 
 ppo-u.5   7454537   4-coumarate--CoA ligase-like 9 
 ppo-u.5   7477039   4-coumarate--CoA ligase-like 9 
 mtr-u.5   11414035   4-coumarate--CoA ligase-like 9 
 mtr-u.5   11431202   4-coumarate--CoA ligase-like 9 
 mtr-u.5   11419136   4-coumarate--CoA ligase-like 9 
 sly-u.5   101266208   4-coumarate--CoA ligase-like 9 
 sly-u.5   101252054   4-coumarate--CoA ligase-like 9 
 osa-u.5   112935996   4-coumarate--CoA ligase-like 5 
 osa-u.5   9270232   4-coumarate--CoA ligase-like 5 
 zma-u.5   100272376   uncharacterized LOC100272376 

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Top 50 coexpressed genes to 107948772 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948772 (ghi-r.1 coexpression data)

CoexMap"107948772"


ghiLOC107948772 | Entrez gene ID : 107948772    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 1 2 2 3 2 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016405 [list] [network] CoA-ligase activity  (67 genes)  IEA  
Protein XP_016738905.1 [sequence] [blastp]
XP_040962865.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1,  vacu 1,  cysk 1  (predict for XP_016738905.1)
chlo 9,  vacu 1,  cysk 1  (predict for XP_040962865.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_016738905.1)
chlo 7,  other 3  (predict for XP_040962865.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948772

.
ath-u.5
for
AT5G63380

.
gma-u.5
for
100804044

.
vvi-u.5
for
100266547

.
vvi-u.5
for
100268159

.
ppo-u.5
for
7454537

.
ppo-u.5
for
7477039

.
mtr-u.5
for
11414035

.
mtr-u.5
for
11431202

.
mtr-u.5
for
11419136

.
sly-u.5
for
101266208

.
sly-u.5
for
101252054

.
osa-u.5
for
112935996

.
osa-u.5
for
9270232

.
zma-u.5
for
100272376

.


Ortholog ID: 2766
Species ath sly sly osa osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT5G63380 LOC101266208 LOC101252054 LOC112935996 LOC9270232 LOC100272376 LOC103855040 LOC100242222 LOC100266547 LOC7477039 LOC7454535 LOC11419136 LOC11414035 LOC123062827 LOC123062828 LOC123445032 LOC107931451 LOC107912089 LOC125598036 LOC106405347 LOC8056122 LOC102588483 LOC102588059 LOC102623270 LOC102627453 LOC100846491 LOC107815751 LOC107819614
Function* AMP-dependent synthetase and ligase family protein 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 uncharacterized LOC100272376 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 9 4-coumarate--CoA ligase-like 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 5
sly01200 Carbon metabolism 3
sly00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00592 alpha-Linolenic acid metabolism 3
osa04146 Peroxisome 2
osa00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00591 Linoleic acid metabolism 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 5
vvi01230 Biosynthesis of amino acids 4
vvi01200 Carbon metabolism 3
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00920 Sulfur metabolism 2
ppo01320 Sulfur cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
mtr00030 Pentose phosphate pathway 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
tae00190 Oxidative phosphorylation 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi00940 Phenylpropanoid biosynthesis 3
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi01230 Biosynthesis of amino acids 6
ghi00270 Cysteine and methionine metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 3
sot01310 Nitrogen cycle 3
sot01200 Carbon metabolism 2
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit04120 Ubiquitin mediated proteolysis 2
cit00270 Cysteine and methionine metabolism 2
cit00670 One carbon pool by folate 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836457 101266208 101252054 112935996 9270232 100272376 103855040 100242222 100266547 7477039 7454535 11419136 11414035 123062827 123062828 123445032 107931451 107912089 125598036 106405347 8056122 102588483 102588059 102623270 102627453 100846491 107815751 107819614
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