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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107949044   mRNA-decapping enzyme-like protein 
 ghi-r.1   107954602   mRNA-decapping enzyme-like protein 
 ghi-r.1   107951708   mRNA-decapping enzyme-like protein 
 ghi-r.1   107929788   mRNA-decapping enzyme-like protein 
 ath-u.5   DCP1   decapping 1 
 bra-r.6   103871583   mRNA-decapping enzyme-like protein 
 bra-r.6   103843401   mRNA-decapping enzyme-like protein 
 bna-r.1   125578615   mRNA-decapping enzyme-like protein 
 bna-r.1   106346339   mRNA-decapping enzyme-like protein 
 cit-r.1   102609579   mRNA-decapping enzyme-like protein 
 cit-r.1   107177484   mRNA-decapping enzyme-like protein 
 gma-u.5   100780081   mRNA-decapping enzyme-like protein 
 gma-u.5   100786833   mRNA-decapping enzyme-like protein 
 gma-u.5   100814161   mRNA-decapping enzyme-like protein 
 vvi-u.5   100242537   mRNA-decapping enzyme-like protein 
 vvi-u.5   100262105   mRNA-decapping enzyme-like protein 
 ppo-u.5   7460081   mRNA-decapping enzyme-like protein 
 ppo-u.5   7465252   mRNA-decapping enzyme-like protein 
 ppo-u.5   18109444   mRNA-decapping enzyme-like protein 
 mtr-u.5   25499412   mRNA-decapping enzyme-like protein 
 mtr-u.5   11414400   mRNA-decapping enzyme-like protein 
 sly-u.5   101247742   mRNA-decapping enzyme-like protein 
 sly-u.5   101243815   mRNA-decapping enzyme-like protein 
 sly-u.5   101254498   mRNA-decapping enzyme-like protein 
 sot-r.1   102577651   uncharacterized LOC102577651 
 sot-r.1   102590364   mRNA-decapping enzyme-like protein 
 sot-r.1   102591744   mRNA-decapping enzyme-like protein 
 nta-r.1   107821837   mRNA-decapping enzyme-like protein 
 nta-r.1   107814109   mRNA-decapping enzyme-like protein 
 nta-r.1   107802058   mRNA-decapping enzyme-like protein 
 osa-u.5   4342837   mRNA-decapping enzyme-like protein 
 osa-u.5   4351547   mRNA-decapping enzyme-like protein 
 zma-u.5   100279265   Dcp1-like decapping family 
 zma-u.5   100282788   uncharacterized LOC100282788 
 zma-u.5   100216708   uncharacterized LOC100216708 
 tae-r.2   123086503   mRNA-decapping enzyme-like protein 
 tae-r.2   123087752   mRNA-decapping enzyme-like protein 
 tae-r.2   123091491   mRNA-decapping enzyme-like protein 
 hvu-r.1   123448041   mRNA-decapping enzyme-like protein 
 hvu-r.1   123394949   mRNA-decapping enzyme-like protein 
 hvu-r.1   123395679   mRNA-decapping enzyme-like protein 
 sbi-r.1   8081821   mRNA-decapping enzyme-like protein 
 sbi-r.1   8080187   mRNA-decapping enzyme-like protein 
 sbi-r.1   110429749   mRNA-decapping enzyme-like protein 
 bdi-r.1   100841064   mRNA-decapping enzyme-like protein 
 bdi-r.1   100846038   mRNA-decapping enzyme-like protein 
 bdi-r.1   100826078   mRNA-decapping enzyme-like protein 
 cre-r.1   CHLRE_07g339250v5   uncharacterized protein 

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Top 50 coexpressed genes to 107949044 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107949044 (ghi-r.1 coexpression data)

CoexMap"107949044"


ghiLOC107949044 | Entrez gene ID : 107949044    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 2 2 3 2 3 2 3 3 3 2 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03018 [list] [network] RNA degradation (286 genes)
GO BP
GO:0031087 [list] [network] deadenylation-independent decapping of nuclear-transcribed mRNA  (13 genes)  IEA  
GO:0000290 [list] [network] deadenylation-dependent decapping of nuclear-transcribed mRNA  (29 genes)  IEA  
GO:0043085 [list] [network] positive regulation of catalytic activity  (127 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (130 genes)  IEA  
GO MF
GO:0008047 [list] [network] enzyme activator activity  (324 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016739242.1 [sequence] [blastp]
XP_040931434.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_016739242.1)
nucl 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_040931434.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_016739242.1)
other 8,  mito 3  (predict for XP_040931434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107949044
ghi-r.1
for
107954602
ghi-r.1
for
107951708
ghi-r.1
for
107929788
ath-u.5
for
DCP1
bra-r.6
for
103871583
bra-r.6
for
103843401
bna-r.1
for
125578615
bna-r.1
for
106346339
cit-r.1
for
102609579
cit-r.1
for
107177484
gma-u.5
for
100780081
gma-u.5
for
100786833
gma-u.5
for
100814161
vvi-u.5
for
100242537
vvi-u.5
for
100262105
ppo-u.5
for
7460081
ppo-u.5
for
7465252
ppo-u.5
for
18109444
mtr-u.5
for
25499412
mtr-u.5
for
11414400
sly-u.5
for
101247742
sly-u.5
for
101243815
sly-u.5
for
101254498
sot-r.1
for
102577651
sot-r.1
for
102590364
sot-r.1
for
102591744
nta-r.1
for
107821837
nta-r.1
for
107814109
nta-r.1
for
107802058
osa-u.5
for
4342837
osa-u.5
for
4351547
zma-u.5
for
100279265
zma-u.5
for
100282788
zma-u.5
for
100216708
tae-r.2
for
123086503
tae-r.2
for
123087752
tae-r.2
for
123091491
hvu-r.1
for
123448041
hvu-r.1
for
123394949
hvu-r.1
for
123395679
sbi-r.1
for
8081821
sbi-r.1
for
8080187
sbi-r.1
for
110429749
bdi-r.1
for
100841064
bdi-r.1
for
100846038
bdi-r.1
for
100826078
cre-r.1
for
CHLRE_07g339250v5


Ortholog ID: 1818
Species ghi ghi ghi ath bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107951708 LOC107896331 LOC107936789 DCP1 LOC103871583 LOC103843401 LOC125578615 LOC106346339 LOC106377036 LOC102609579 LOC107177484 LOC100780081 LOC100814161 LOC100783361 LOC100242537 LOC100262105 LOC7460081 LOC7465252 LOC18109444 LOC25499412 LOC11414400 LOC101247742 LOC101243815 LOC101254498 LOC102577651 LOC102590364 LOC102591744 LOC107821837 LOC107784986 LOC107773997 LOC4342837 LOC4351547 LOC100216708 LOC100194374 LOC100191586 LOC123091491 LOC123120140 LOC123102982 LOC123448041 LOC123394949 LOC123395679 LOC8081821 LOC8080187 LOC110429749 LOC100841064 LOC100846038 LOC100826695 CHLRE_07g339250v5
Function* mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein decapping 1 mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein-like mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein uncharacterized LOC102577651 mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein uncharacterized LOC100216708 uncharacterized LOC100194374 uncharacterized LOC100191586 mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein mRNA-decapping enzyme-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 9
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03250 Viral life cycle - HIV-1 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 9
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03018 RNA degradation 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04144 Endocytosis 2
ppo03410 Base excision repair 2
ppo00790 Folate biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta00540 Lipopolysaccharide biosynthesis 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa03040 Spliceosome 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03015 mRNA surveillance pathway 2
zma04136 Autophagy - other 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
zma03018 RNA degradation 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae04144 Endocytosis 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae04144 Endocytosis 3
tae04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu03015 mRNA surveillance pathway 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
bdi00190 Oxidative phosphorylation 3
bdi03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107951708 107896331 107936789 837357 103871583 103843401 125578615 106346339 106377036 102609579 107177484 100780081 100814161 100783361 100242537 100262105 7460081 7465252 18109444 25499412 11414400 101247742 101243815 101254498 102577651 102590364 102591744 107821837 107784986 107773997 4342837 4351547 100216708 100194374 100191586 123091491 123120140 123102982 123448041 123394949 123395679 8081821 8080187 110429749 100841064 100846038 100826695 66054104
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