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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107951611   40S ribosomal protein S18 
 ghi-r.1   107910470   40S ribosomal protein S18 
 ghi-r.1   107914086   40S ribosomal protein S18 
 ghi-r.1   107943702   40S ribosomal protein S18 
 ath-u.5   RPS18C   S18 ribosomal protein 
 ath-u.5   PFL   Ribosomal protein S13/S18 family 
 ath-u.5   AT1G34030   Ribosomal protein S13/S18 family 
 bra-r.6   103868855   40S ribosomal protein S18 
 bra-r.6   103838875   40S ribosomal protein S18 
 bra-r.6   103858540   40S ribosomal protein S18 
 bna-r.1   111214089   40S ribosomal protein S18 
 bna-r.1   125589239   40S ribosomal protein S18 
 bna-r.1   111210018   40S ribosomal protein S18-like 
 cit-r.1   102628952   40S ribosomal protein S18 
 cit-r.1   102627922   40S ribosomal protein S18 
 gma-u.5   100306646   uncharacterized LOC100306646 
 gma-u.5   100499922   40S ribosomal protein S18 
 gma-u.5   100500087   uncharacterized LOC100500087 
 vvi-u.5   100254425   small ribosomal subunit protein uS13z/uS13y/uS13x 
 ppo-u.5   7480033   40S ribosomal protein S18 
 ppo-u.5   7464841   40S ribosomal protein S18 
 ppo-u.5   7492484   40S ribosomal protein S18 
 mtr-u.5   11414190   40S ribosomal protein S18 
 mtr-u.5   11428006   40S ribosomal protein S18 
 mtr-u.5   25496287   40S ribosomal protein S18 
 sly-u.5   101249649   small ribosomal subunit protein uS13z/uS13y/uS13x 
 sly-u.5   101266399   small ribosomal subunit protein uS13z/uS13y/uS13x 
 sly-u.5   101268633   40S ribosomal protein S18-like 
 sot-r.1   102586955   40S ribosomal protein S18 
 sot-r.1   102577535   uncharacterized LOC102577535 
 sot-r.1   102587187   40S ribosomal protein S18-like 
 nta-r.1   107814426   small ribosomal subunit protein uS13z/uS13y/uS13x 
 nta-r.1   107777446   small ribosomal subunit protein uS13z/uS13y/uS13x 
 nta-r.1   107815982   small ribosomal subunit protein uS13z/uS13y/uS13x-like 
 osa-u.5   107275870   small ribosomal subunit protein uS13z/uS13y/uS13x 
 osa-u.5   4342526   small ribosomal subunit protein uS13z/uS13y/uS13x 
 osa-u.5   4334407   small ribosomal subunit protein uS13z/uS13y/uS13x 
 zma-u.5   100285246   40S ribosomal protein S18 
 zma-u.5   100273341   ribosomal protein S18 
 tae-r.2   123113650   40S ribosomal protein S18 
 tae-r.2   123105378   40S ribosomal protein S18 
 tae-r.2   123123169   40S ribosomal protein S18 
 hvu-r.1   123452656   40S ribosomal protein S18 
 sbi-r.1   8060714   40S ribosomal protein S18 
 sbi-r.1   8061179   40S ribosomal protein S18 
 bdi-r.1   100844498   40S ribosomal protein S18 
 bdi-r.1   100828019   40S ribosomal protein S18 
 cre-r.1   CHLRE_06g272950v5   ribosomal protein S18 

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Top 50 coexpressed genes to 107951611 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107951611 (ghi-r.1 coexpression data)

CoexMap"107951611"


ghiLOC107951611 | Entrez gene ID : 107951611    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 1 3 3 3 3 3 3 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (321 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016742201.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  cysk 1  (predict for XP_016742201.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016742201.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107951611
ghi-r.1
for
107910470
ghi-r.1
for
107914086
ghi-r.1
for
107943702
ath-u.5
for
RPS18C
ath-u.5
for
PFL
ath-u.5
for
AT1G34030
bra-r.6
for
103868855
bra-r.6
for
103838875
bra-r.6
for
103858540
bna-r.1
for
111214089
bna-r.1
for
125589239
bna-r.1
for
111210018
cit-r.1
for
102628952
cit-r.1
for
102627922
gma-u.5
for
100306646
gma-u.5
for
100499922
gma-u.5
for
100500087
vvi-u.5
for
100254425
ppo-u.5
for
7480033
ppo-u.5
for
7464841
ppo-u.5
for
7492484
mtr-u.5
for
11414190
mtr-u.5
for
11428006
mtr-u.5
for
25496287
sly-u.5
for
101249649
sly-u.5
for
101266399
sly-u.5
for
101268633
sot-r.1
for
102586955
sot-r.1
for
102577535
sot-r.1
for
102587187
nta-r.1
for
107814426
nta-r.1
for
107777446
nta-r.1
for
107815982
osa-u.5
for
107275870
osa-u.5
for
4342526
osa-u.5
for
4334407
zma-u.5
for
100285246
zma-u.5
for
100273341
tae-r.2
for
123113650
tae-r.2
for
123105378
tae-r.2
for
123123169
hvu-r.1
for
123452656
sbi-r.1
for
8060714
sbi-r.1
for
8061179
bdi-r.1
for
100844498
bdi-r.1
for
100828019
cre-r.1
for
CHLRE_06g272950v5


Ortholog ID: 2165
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma gma vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC107910470 LOC107914086 LOC107943702 RPS18C PFL AT1G34030 LOC103838875 LOC103858540 LOC103840031 LOC111214089 LOC111210018 LOC106423553 LOC102628952 LOC102627922 LOC100499922 LOC100500087 LOC100791227 LOC100254425 LOC7480033 LOC7464841 LOC7492484 LOC11414190 LOC11428006 LOC101249649 LOC101266399 LOC101268633 LOC102586955 LOC102577535 LOC102587187 LOC107814426 LOC107815982 LOC107798308 LOC107275870 LOC4342526 LOC4334407 LOC100285246 LOC100273341 LOC123105378 LOC123149133 LOC123157009 LOC123452656 LOC8060714 LOC8061179 LOC100844498 LOC100828019 CHLRE_06g272950v5
Function* 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 S18 ribosomal protein Ribosomal protein S13/S18 family Ribosomal protein S13/S18 family 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18-like 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 uncharacterized LOC100500087 40S ribosomal protein S18 small ribosomal subunit protein uS13z/uS13y/uS13x 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 small ribosomal subunit protein uS13z/uS13y/uS13x small ribosomal subunit protein uS13z/uS13y/uS13x 40S ribosomal protein S18-like 40S ribosomal protein S18 uncharacterized LOC102577535 40S ribosomal protein S18-like small ribosomal subunit protein uS13z/uS13y/uS13x small ribosomal subunit protein uS13z/uS13y/uS13x-like small ribosomal subunit protein uS13z/uS13y/uS13x-like small ribosomal subunit protein uS13z/uS13y/uS13x small ribosomal subunit protein uS13z/uS13y/uS13x small ribosomal subunit protein uS13z/uS13y/uS13x 40S ribosomal protein S18 ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 ribosomal protein S18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot00220 Arginine biosynthesis 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot04120 Ubiquitin mediated proteolysis 2
sot00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
bdi03018 RNA degradation 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107910470 107914086 107943702 826569 838884 840300 103838875 103858540 103840031 111214089 111210018 106423553 102628952 102627922 100499922 100500087 100791227 100254425 7480033 7464841 7492484 11414190 11428006 101249649 101266399 101268633 102586955 102577535 102587187 107814426 107815982 107798308 107275870 4342526 4334407 100285246 100273341 123105378 123149133 123157009 123452656 8060714 8061179 100844498 100828019 5721802
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