Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107952373   chlorophyll a-b binding protein 7, chloroplastic 
 ghi-r.1   107945370   chlorophyll a-b binding protein 7, chloroplastic 
 ath-u.5   AT1G76570   Chlorophyll A-B binding family protein 
 bra-r.6   103853033   chlorophyll a-b binding protein 7, chloroplastic 
 bna-r.1   106397600   chlorophyll a-b binding protein 7, chloroplastic 
 bna-r.1   125582544   chlorophyll a-b binding protein 7, chloroplastic-like 
 cit-r.1   102612622   chlorophyll a-b binding protein 7, chloroplastic 
 gma-u.5   100786260   chlorophyll a-b binding protein 4, chloroplastic-like 
 vvi-u.5   100256544   chlorophyll a-b binding protein 7, chloroplastic 
 ppo-u.5   7457192   chlorophyll a-b binding protein 7, chloroplastic 
 mtr-u.5   25482231   chlorophyll a-b binding protein 7, chloroplastic 
 sly-u.5   101246628   chlorophyll a-b binding protein 7, chloroplastic 
 sot-r.1   102590605   chlorophyll a-b binding protein of LHCII type 1 
 nta-r.1   107823229   chlorophyll a-b binding protein 7, chloroplastic 
 osa-u.5   4346649   chlorophyll a-b binding protein 7, chloroplastic 
 zma-u.5   100274085   uncharacterized LOC100274085 
 tae-r.2   123121097   chlorophyll a-b binding protein 7, chloroplastic 
 tae-r.2   123111646   chlorophyll a-b binding protein 7, chloroplastic 
 tae-r.2   123103444   chlorophyll a-b binding protein 7, chloroplastic 
 hvu-r.1   123397671   chlorophyll a-b binding protein 7, chloroplastic 
 sbi-r.1   8064653   chlorophyll a-b binding protein of LHCII type 1 
 cre-r.1   CHLRE_02g110750v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107952373 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107952373 (ghi-r.1 coexpression data)

CoexMap"107952373"


ghiLOC107952373 | Entrez gene ID : 107952373    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi cre bdi
Paralog 2 1 1 2 1 1 1 1 1 1 1 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00196 [list] [network] Photosynthesis - antenna proteins (51 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (55 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (330 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
Protein XP_016743120.2 [sequence] [blastp]
XP_040943070.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_016743120.2)
plas 5,  cyto_plas 4,  cyto 2,  E.R. 1  (predict for XP_040943070.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_016743120.2)
scret 5  (predict for XP_040943070.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107952373
ghi-r.1
for
107945370
ath-u.5
for
AT1G76570
bra-r.6
for
103853033
bna-r.1
for
106397600
bna-r.1
for
125582544
cit-r.1
for
102612622
gma-u.5
for
100786260
vvi-u.5
for
100256544
ppo-u.5
for
7457192
mtr-u.5
for
25482231
sly-u.5
for
101246628
sot-r.1
for
102590605
nta-r.1
for
107823229
osa-u.5
for
4346649
zma-u.5
for
100274085
tae-r.2
for
123121097
tae-r.2
for
123111646
tae-r.2
for
123103444
hvu-r.1
for
123397671
sbi-r.1
for
8064653
cre-r.1
for
CHLRE_02g110750v5


Ortholog ID: 11525
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi cre
Symbol LOC107952373 LOC107945370 AT1G76570 LOC103853033 LOC106397600 LOC125582544 LOC102612622 LOC100786260 LOC100256544 LOC7457192 LOC25482231 LOC101246628 LOC102590605 LOC107823229 LOC4346649 LOC100274085 LOC123121097 LOC123111646 LOC123103444 LOC123397671 LOC8064653 CHLRE_02g110750v5
Function* chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic Chlorophyll A-B binding family protein chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic-like chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 4, chloroplastic-like chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein of LHCII type 1 chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic uncharacterized LOC100274085 chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein 7, chloroplastic chlorophyll a-b binding protein of LHCII type 1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 3
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 2
bna04146 Peroxisome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma01240 Biosynthesis of cofactors 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107952373 107945370 843990 103853033 106397600 125582544 102612622 100786260 100256544 7457192 25482231 101246628 102590605 107823229 4346649 100274085 123121097 123111646 123103444 123397671 8064653 5725483
The preparation time of this page was 0.1 [sec].