ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107954206	uncharacterized LOC107954206
ghi-r.1	107960036	uncharacterized LOC107960036
ath-u.5	AT5G52370	28S ribosomal S34 protein
ath-u.5	AT5G58990	28S ribosomal S34 protein
bra-r.6	103856653	uncharacterized LOC103856653
bra-r.6	103851606	uncharacterized LOC103851606
bna-r.1	BNAC02G10390D	uncharacterized BNAC02G10390D
bna-r.1	BNAC03G12240D	uncharacterized BNAC03G12240D
bna-r.1	BNAA03G09690D	uncharacterized BNAA03G09690D
cit-r.1	102624364	hypothetical protein
gma-u.5	100816970	uncharacterized LOC100816970
gma-u.5	100777329	uncharacterized LOC100777329
vvi-u.5	100255366	uncharacterized LOC100255366
ppo-u.5	7481504	uncharacterized LOC7481504
ppo-u.5	7468016	uncharacterized LOC7468016
mtr-u.5	11414999	uncharacterized LOC11414999
sly-u.5	101263326	uncharacterized LOC101263326
sot-r.1	102580518	uncharacterized LOC102580518
nta-r.1	107773530	uncharacterized LOC107773530
nta-r.1	107765765	uncharacterized LOC107765765
osa-u.5	4329366	uncharacterized LOC4329366
zma-u.5	103645763	uncharacterized LOC103645763
zma-u.5	100278442	uncharacterized LOC100278442
tae-r.2	123135443	uncharacterized LOC123135443
tae-r.2	123143037	uncharacterized LOC123143037
tae-r.2	123152079	uncharacterized LOC123152079
hvu-r.1	123404820	uncharacterized LOC123404820
hvu-r.1	123407652	uncharacterized LOC123407652
sbi-r.1	8085864	uncharacterized LOC8085864
bdi-r.1	100841147	uncharacterized LOC100841147

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(1525 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(1075 genes)

IEA

Protein

XP_016745184.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 4

(predict for XP_016745184.2)

Subcellular
localization
TargetP

other 1

(predict for XP_016745184.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107954206	ghi-r.1 for 107960036	ath-u.5 for AT5G52370	ath-u.5 for AT5G58990	bra-r.6 for 103856653	bra-r.6 for 103851606	bna-r.1 for BNAC02G10390D	bna-r.1 for BNAC03G12240D	bna-r.1 for BNAA03G09690D	cit-r.1 for 102624364	gma-u.5 for 100816970	gma-u.5 for 100777329	vvi-u.5 for 100255366	ppo-u.5 for 7481504	ppo-u.5 for 7468016	mtr-u.5 for 11414999	sly-u.5 for 101263326	sot-r.1 for 102580518	nta-r.1 for 107773530	nta-r.1 for 107765765	osa-u.5 for 4329366	zma-u.5 for 103645763	zma-u.5 for 100278442	tae-r.2 for 123135443	tae-r.2 for 123143037	tae-r.2 for 123152079	hvu-r.1 for 123404820	hvu-r.1 for 123407652	sbi-r.1 for 8085864	bdi-r.1 for 100841147

Ortholog

Ortholog ID: 5859

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107954206

uncharacterized LOC107960036

28S ribosomal S34 protein

uncharacterized LOC103856653

uncharacterized LOC103851606

uncharacterized BNAC02G10390D

uncharacterized BNAC03G12240D

uncharacterized LOC111207195

hypothetical protein

uncharacterized LOC100816970

uncharacterized LOC100777329

uncharacterized LOC100255366

uncharacterized LOC7481504

uncharacterized LOC7468016

uncharacterized LOC11414999

uncharacterized LOC101263326

uncharacterized LOC102580518

uncharacterized LOC107773530

uncharacterized LOC107765765

uncharacterized LOC4329366

uncharacterized LOC103645763

uncharacterized LOC100278442

uncharacterized LOC123168568

uncharacterized LOC123131654

uncharacterized LOC123404820

uncharacterized LOC123407652

uncharacterized LOC8085864

uncharacterized LOC100841147

Coexmap

Please wait a moment.

Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4
ath03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	6
bra03040	Spliceosome	5
bra03013	Nucleocytoplasmic transport	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	13
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma00230	Purine metabolism	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	15
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr03010	Ribosome	2
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6
sot03018	RNA degradation	4
sot03010	Ribosome	3
sot03020	RNA polymerase	2
sot03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4
tae03008	Ribosome biogenesis in eukaryotes	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	14
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	9
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

107954206

107960036

835313

836016

103856653

103851606

106446563

106385186

111207195

102624364

100816970

100777329

100255366

7481504

7468016

11414999

101263326

102580518

107773530

107765765

4329366

103645763

100278442

123168568

123131654

123404820

123407652

8085864

100841147

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107954206 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107954206 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	2	3	1	2	1	2	1	1	1	2	1	2	3	2	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107954206 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107954206 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**