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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085864   uncharacterized LOC8085864 
 zma-u.5   103645763   uncharacterized LOC103645763 
 zma-u.5   100278442   uncharacterized LOC100278442 
 osa-u.5   4329366   uncharacterized LOC4329366 
 ath-u.5   AT5G52370   28S ribosomal S34 protein 
 ath-u.5   AT5G58990   28S ribosomal S34 protein 
 gma-u.5   100816970   uncharacterized LOC100816970 
 gma-u.5   100777329   uncharacterized LOC100777329 
 gma-u.5   100306657   uncharacterized LOC100306657 
 sly-u.5   101263326   uncharacterized LOC101263326 
 vvi-u.5   100255366   uncharacterized LOC100255366 
 ppo-u.5   7481504   uncharacterized LOC7481504 
 ppo-u.5   7468016   uncharacterized LOC7468016 
 mtr-u.5   11414999   uncharacterized LOC11414999 

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Top 50 coexpressed genes to 8085864 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085864 (sbi-r.1 coexpression data)

CoexMap"8085864"


sbiLOC8085864 | Entrez gene ID : 8085864    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_021318990.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_021318990.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_021318990.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085864

.
zma-u.5
for
103645763

.
zma-u.5
for
100278442

.
osa-u.5
for
4329366

.
ath-u.5
for
AT5G52370

.
ath-u.5
for
AT5G58990

.
gma-u.5
for
100816970

.
gma-u.5
for
100777329

.
gma-u.5
for
100306657

.
sly-u.5
for
101263326

.
vvi-u.5
for
100255366

.
ppo-u.5
for
7481504

.
ppo-u.5
for
7468016

.
mtr-u.5
for
11414999

.


Ortholog ID: 5859
Species ath ath gma sly osa zma zma bra bra vvi ppo ppo mtr tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G58990 AT5G52370 LOC100816970 LOC101263326 LOC4329366 LOC103645763 LOC100278442 LOC103856653 LOC103851606 LOC100255366 LOC7481504 LOC7468016 LOC11414999 LOC123131654 LOC123404820 LOC123407652 LOC107954206 LOC107960036 LOC111207195 BNAC03G12240D LOC8085864 LOC102580518 LOC102624364 LOC100841147 LOC107765765 LOC107773530
Function* 28S ribosomal S34 protein 28S ribosomal S34 protein uncharacterized LOC100816970 uncharacterized LOC101263326 uncharacterized LOC4329366 uncharacterized LOC103645763 uncharacterized LOC100278442 uncharacterized LOC103856653 uncharacterized LOC103851606 uncharacterized LOC100255366 uncharacterized LOC7481504 uncharacterized LOC7468016 uncharacterized LOC11414999 uncharacterized LOC123131654 uncharacterized LOC123404820 uncharacterized LOC123407652 uncharacterized LOC107954206 uncharacterized LOC107960036 uncharacterized LOC111207195 uncharacterized BNAC03G12240D uncharacterized LOC8085864 uncharacterized LOC102580518 hypothetical protein uncharacterized LOC100841147 uncharacterized LOC107765765 uncharacterized LOC107773530
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03010 Ribosome 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03018 RNA degradation 4
sot03010 Ribosome 3
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836016 835313 100816970 101263326 4329366 103645763 100278442 103856653 103851606 100255366 7481504 7468016 11414999 123131654 123404820 123407652 107954206 107960036 111207195 106385186 8085864 102580518 102624364 100841147 107765765 107773530
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