ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100306657	uncharacterized LOC100306657
gma-r.7	100306657	uncharacterized LOC100306657
gma-m.5	100306657	uncharacterized LOC100306657
gma-u.5	100777329	uncharacterized LOC100777329
gma-u.5	100816970	uncharacterized LOC100816970
mtr-u.5	11414999	uncharacterized LOC11414999
ppo-u.5	7468016	uncharacterized LOC7468016
ppo-u.5	7481504	uncharacterized LOC7481504
ath-u.5	AT5G52370	28S ribosomal S34 protein
ath-u.5	AT5G58990	28S ribosomal S34 protein
vvi-u.5	100255366	uncharacterized LOC100255366
sly-u.5	101263326	uncharacterized LOC101263326
osa-u.5	4329366	uncharacterized LOC4329366
zma-u.5	100278442	uncharacterized LOC100278442
zma-u.5	103645763	uncharacterized LOC103645763

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(1058 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(610 genes)

IEA

Protein

NP_001238279.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, chlo 4

(predict for NP_001238279.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_001238279.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100306657	gma-r.7 for 100306657	gma-m.5 for 100306657	gma-u.5 for 100777329	gma-u.5 for 100816970	mtr-u.5 for 11414999	ppo-u.5 for 7468016	ppo-u.5 for 7481504	ath-u.5 for AT5G52370	ath-u.5 for AT5G58990	vvi-u.5 for 100255366	sly-u.5 for 101263326	osa-u.5 for 4329366	zma-u.5 for 100278442	zma-u.5 for 103645763

Ortholog

Ortholog ID: 5859

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100816970

uncharacterized LOC11414999

uncharacterized LOC7481504

uncharacterized LOC7468016

28S ribosomal S34 protein

uncharacterized LOC103856653

uncharacterized LOC103851606

uncharacterized LOC100255366

uncharacterized LOC107954206

uncharacterized LOC107960036

uncharacterized LOC111207195

uncharacterized BNAC03G12240D

hypothetical protein

uncharacterized LOC101263326

uncharacterized LOC102580518

uncharacterized LOC107765765

uncharacterized LOC107773530

uncharacterized LOC4329366

uncharacterized LOC103645763

uncharacterized LOC100278442

uncharacterized LOC123131654

uncharacterized LOC123404820

uncharacterized LOC123407652

uncharacterized LOC8085864

uncharacterized LOC100841147

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma00230	Purine metabolism	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr03010	Ribosome	2
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	15
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4
ath03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	6
bra03040	Spliceosome	5
bra03013	Nucleocytoplasmic transport	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	13
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6
sot03018	RNA degradation	4
sot03010	Ribosome	3
sot03020	RNA polymerase	2
sot03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4
tae03008	Ribosome biogenesis in eukaryotes	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	14
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	9
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100816970

11414999

7481504

7468016

836016

835313

103856653

103851606

100255366

107954206

107960036

111207195

106385186

102624364

101263326

102580518

107765765

107773530

4329366

103645763

100278442

123131654

123404820

123407652

8085864

100841147

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100306657 (gma-u.5 coexpression data)

Top 50 enrichment test to 100306657 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	2	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100306657 (gma-u.5 coexpression data)

Top 50 enrichment test to 100306657 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**