Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107954644   transcription factor PIF1 
 ath-u.5   PIL5   phytochrome interacting factor 3-like 5 
 gma-u.5   100797225   transcription factor PIF1 
 gma-u.5   100792121   transcription factor PIF1 
 vvi-u.5   100264869   transcription factor PIF1 
 ppo-u.5   7459525   transcription factor PIF1 
 mtr-u.5   11419484   transcription factor PIF1 
 mtr-u.5   25484155   transcription factor PIF1 
 sly-u.5   101260141   transcription factor PIF1 
 sly-u.5   101264668   transcription factor PIF1 

close


Top 50 coexpressed genes to 107954644 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107954644 (ghi-r.1 coexpression data)

CoexMap"107954644"


ghiLOC107954644 | Entrez gene ID : 107954644    
Species ghi ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi osa sot nta cre tae zma
Paralog 1 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016745749.2 [sequence] [blastp]
XP_040952426.1 [sequence] [blastp]
XP_040952427.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_016745749.2)
nucl 10  (predict for XP_040952426.1)
nucl 10  (predict for XP_040952427.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016745749.2)
other 9  (predict for XP_040952426.1)
other 9  (predict for XP_040952427.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107954644
ath-u.5
for
PIL5
gma-u.5
for
100797225
gma-u.5
for
100792121
vvi-u.5
for
100264869
ppo-u.5
for
7459525
mtr-u.5
for
11419484
mtr-u.5
for
25484155
sly-u.5
for
101260141
sly-u.5
for
101264668


Ortholog ID: 8878
Species ghi ghi ath bra bna cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta
Symbol LOC107924576 LOC107925868 PIL5 LOC117126501 LOC106357954 LOC102621687 LOC100788491 LOC100797225 LOC100264869 LOC7459525 LOC11419484 LOC25484155 LOC101264668 LOC101260141 LOC102585610 LOC102583507 LOC107808530 LOC107828013
Function* transcription factor PIF1 transcription factor PIF1 phytochrome interacting factor 3-like 5 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1 transcription factor PIF1-like transcription factor PIF1-like transcription factor PIF1-like transcription factor PIF1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 9
sot04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 5
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924576 107925868 816538 117126501 106357954 102621687 100788491 100797225 100264869 7459525 11419484 25484155 101264668 101260141 102585610 102583507 107808530 107828013
The preparation time of this page was 0.1 [sec].