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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107954799   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 ghi-r.1   107955282   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 ath-u.5   AT5G16140   Peptidyl-tRNA hydrolase family protein 
 ath-u.5   AT5G38290   Peptidyl-tRNA hydrolase family protein 
 bra-r.6   103850111   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic 
 bra-r.6   103846354   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 bna-r.1   111207228   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic-like 
 bna-r.1   106352646   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic 
 cit-r.1   102607369   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic 
 gma-u.5   100804132   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like 
 vvi-u.5   100248112   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 ppo-u.5   7477431   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 mtr-u.5   11441034   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 mtr-u.5   11433742   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 sly-u.5   101265696   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 sot-r.1   102588394   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 nta-r.1   107790824   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 nta-r.1   107762066   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 osa-u.5   4325801   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like 
 zma-u.5   541812   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 tae-r.2   123068390   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 tae-r.2   123076935   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 tae-r.2   123059911   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 hvu-r.1   123442549   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like 
 sbi-r.1   8061362   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 bdi-r.1   100830400   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 

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Top 50 coexpressed genes to 107954799 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954799 (ghi-r.1 coexpression data)

CoexMap"107954799"


ghiLOC107954799 | Entrez gene ID : 107954799    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 2 1 1 1 1 2 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004045 [list] [network] peptidyl-tRNA hydrolase activity  (20 genes)  IEA  
Protein XP_016745961.1 [sequence] [blastp]
XP_016745964.1 [sequence] [blastp]
XP_016745965.1 [sequence] [blastp]
XP_016745968.1 [sequence] [blastp]
XP_016745969.1 [sequence] [blastp]
XP_016745970.1 [sequence] [blastp]
XP_040953677.1 [sequence] [blastp]
XP_040953678.1 [sequence] [blastp]
XP_040953679.1 [sequence] [blastp]
XP_040953680.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_016745961.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_016745964.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_016745965.1)
mito 6,  chlo_mito 4,  cyto_mito 3,  chlo 3  (predict for XP_016745968.1)
mito 6,  chlo_mito 4,  cyto_mito 3,  chlo 3  (predict for XP_016745969.1)
mito 6,  chlo_mito 4,  cyto_mito 3,  chlo 3  (predict for XP_016745970.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_040953677.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_040953678.1)
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 1  (predict for XP_040953679.1)
mito 6,  chlo_mito 4,  cyto_mito 3,  chlo 3  (predict for XP_040953680.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_016745961.1)
scret 7  (predict for XP_016745964.1)
scret 7  (predict for XP_016745965.1)
chlo 7  (predict for XP_016745968.1)
chlo 7  (predict for XP_016745969.1)
chlo 7  (predict for XP_016745970.1)
scret 7  (predict for XP_040953677.1)
scret 7  (predict for XP_040953678.1)
scret 7  (predict for XP_040953679.1)
chlo 7  (predict for XP_040953680.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107954799
ghi-r.1
for
107955282
ath-u.5
for
AT5G16140
ath-u.5
for
AT5G38290
bra-r.6
for
103850111
bra-r.6
for
103846354
bna-r.1
for
111207228
bna-r.1
for
106352646
cit-r.1
for
102607369
gma-u.5
for
100804132
vvi-u.5
for
100248112
ppo-u.5
for
7477431
mtr-u.5
for
11441034
mtr-u.5
for
11433742
sly-u.5
for
101265696
sot-r.1
for
102588394
nta-r.1
for
107790824
nta-r.1
for
107762066
osa-u.5
for
4325801
zma-u.5
for
541812
tae-r.2
for
123068390
tae-r.2
for
123076935
tae-r.2
for
123059911
hvu-r.1
for
123442549
sbi-r.1
for
8061362
bdi-r.1
for
100830400


Ortholog ID: 8138
Species ghi ghi ath ath bra bra bna bna cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107954799 LOC107955282 AT5G16140 AT5G38290 LOC103850111 LOC103846354 LOC111207228 LOC106352646 LOC102607369 LOC100804132 LOC100248112 LOC7477431 LOC11441034 LOC11433742 LOC101265696 LOC102588394 LOC107790824 LOC107762066 LOC4325801 LOC541812 LOC123068390 LOC123076935 LOC123059911 LOC123442549 LOC8061362 LOC100830400
Function* chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic Peptidyl-tRNA hydrolase family protein Peptidyl-tRNA hydrolase family protein chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00730 Thiamine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954799 107955282 831471 833811 103850111 103846354 111207228 106352646 102607369 100804132 100248112 7477431 11441034 11433742 101265696 102588394 107790824 107762066 4325801 541812 123068390 123076935 123059911 123442549 8061362 100830400
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