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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8061362   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 zma-u.5   541812   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 osa-u.5   4325801   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like 
 tae-r.2   123076935   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 tae-r.2   123068390   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 tae-r.2   123059911   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 hvu-r.1   123442549   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like 
 bdi-r.1   100830400   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 ath-u.5   AT5G16140   Peptidyl-tRNA hydrolase family protein 
 ath-u.5   AT5G38290   Peptidyl-tRNA hydrolase family protein 
 gma-u.5   100804132   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like 
 sly-u.5   101265696   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 bra-r.6   103850111   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic 
 bra-r.6   103846354   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 vvi-u.5   100248112   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 ppo-u.5   7477431   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 mtr-u.5   11441034   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 mtr-u.5   11433742   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 ghi-r.1   107955282   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 ghi-r.1   107954799   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 bna-r.1   111207228   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic-like 
 bna-r.1   106352646   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic 
 sot-r.1   102588394   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 
 cit-r.1   102607369   chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic 
 nta-r.1   107790824   chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic 
 nta-r.1   107762066   chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic 

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Top 50 coexpressed genes to 8061362 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8061362 (sbi-r.1 coexpression data)

CoexMap"8061362"


sbiLOC8061362 | Entrez gene ID : 8061362      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 2 1 1 2 1 1 2 2 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004045 [list] [network] peptidyl-tRNA hydrolase activity  (7 genes)  IEA  
Protein XP_002457428.1 [sequence] [blastp]
XP_021313371.1 [sequence] [blastp]
XP_021313372.1 [sequence] [blastp]
XP_021313373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_002457428.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_021313371.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_021313372.1)
chlo 9,  chlo_mito 5  (predict for XP_021313373.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002457428.1)
chlo 9  (predict for XP_021313371.1)
chlo 9  (predict for XP_021313372.1)
chlo 9  (predict for XP_021313373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8061362
zma-u.5
for
541812
osa-u.5
for
4325801
tae-r.2
for
123076935
tae-r.2
for
123068390
tae-r.2
for
123059911
hvu-r.1
for
123442549
bdi-r.1
for
100830400
ath-u.5
for
AT5G16140
ath-u.5
for
AT5G38290
gma-u.5
for
100804132
sly-u.5
for
101265696
bra-r.6
for
103850111
bra-r.6
for
103846354
vvi-u.5
for
100248112
ppo-u.5
for
7477431
mtr-u.5
for
11441034
mtr-u.5
for
11433742
ghi-r.1
for
107955282
ghi-r.1
for
107954799
bna-r.1
for
111207228
bna-r.1
for
106352646
sot-r.1
for
102588394
cit-r.1
for
102607369
nta-r.1
for
107790824
nta-r.1
for
107762066


Ortholog ID: 8138
Species sbi zma osa tae tae tae hvu bdi ath ath gma sly bra bra vvi ppo mtr mtr ghi ghi bna bna sot cit nta nta
Symbol LOC8061362 LOC541812 LOC4325801 LOC123076935 LOC123068390 LOC123059911 LOC123442549 LOC100830400 AT5G16140 AT5G38290 LOC100804132 LOC101265696 LOC103850111 LOC103846354 LOC100248112 LOC7477431 LOC11441034 LOC11433742 LOC107955282 LOC107954799 LOC111207228 LOC106352646 LOC102588394 LOC102607369 LOC107790824 LOC107762066
Function* chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic Peptidyl-tRNA hydrolase family protein Peptidyl-tRNA hydrolase family protein chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic-like chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8061362 541812 4325801 123076935 123068390 123059911 123442549 100830400 831471 833811 100804132 101265696 103850111 103846354 100248112 7477431 11441034 11433742 107955282 107954799 111207228 106352646 102588394 102607369 107790824 107762066
The preparation time of this page was 3.1 [sec].