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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107955128   protein INVOLVED IN DE NOVO 2 
 ghi-r.1   107958454   factor of DNA methylation 1 
 ghi-r.1   107900468   protein INVOLVED IN DE NOVO 2 
 ghi-r.1   107900469   protein INVOLVED IN DE NOVO 2 
 ath-u.5   IDN2   XH/XS domain-containing protein 
 ath-u.5   FDM2   XH/XS domain-containing protein 
 bra-r.6   103830457   factor of DNA methylation 5 
 bra-r.6   103842874   factor of DNA methylation 1-like 
 bra-r.6   103872390   factor of DNA methylation 1 
 bna-r.1   125575041   protein INVOLVED IN DE NOVO 2-like 
 bna-r.1   125591286   factor of DNA methylation 1-like 
 bna-r.1   111198617   protein INVOLVED IN DE NOVO 2-like 
 cit-r.1   102620954   factor of DNA methylation 4 
 cit-r.1   102629124   factor of DNA methylation 1 
 cit-r.1   102629537   protein INVOLVED IN DE NOVO 2-like 
 gma-u.5   100790829   factor of DNA methylation 1 
 gma-u.5   100798940   factor of DNA methylation 1 
 gma-u.5   102665742   kinesin-like protein KIF20B 
 vvi-u.5   100260350   protein INVOLVED IN DE NOVO 2 
 vvi-u.5   100257549   factor of DNA methylation 1 
 vvi-u.5   100252420   factor of DNA methylation 1 
 ppo-u.5   7458138   protein INVOLVED IN DE NOVO 2 
 ppo-u.5   18102687   factor of DNA methylation 4 
 ppo-u.5   7478299   factor of DNA methylation 1 
 mtr-u.5   11440090   factor of DNA methylation 1 
 mtr-u.5   11425283   factor of DNA methylation 1 
 mtr-u.5   25489298   protein INVOLVED IN DE NOVO 2 
 sly-u.5   101256002   protein INVOLVED IN DE NOVO 2 
 sly-u.5   101244470   factor of DNA methylation 1 
 sot-r.1   102598897   factor of DNA methylation 1-like 
 sot-r.1   102599221   factor of DNA methylation 1-like 
 sot-r.1   102585012   protein INVOLVED IN DE NOVO 2 
 nta-r.1   107774607   factor of DNA methylation 1 
 nta-r.1   107806269   factor of DNA methylation 1 
 nta-r.1   107818442   factor of DNA methylation 1-like 
 osa-u.5   4329065   factor of DNA methylation 1 
 osa-u.5   4326595   protein INVOLVED IN DE NOVO 2 
 osa-u.5   4325982   protein INVOLVED IN DE NOVO 2 
 zma-u.5   100383007   putative XH domain family protein 
 zma-u.5   100279850   uncharacterized LOC100279850 
 zma-u.5   100382110   putative XH domain family protein 
 tae-r.2   123096464   factor of DNA methylation 1 
 tae-r.2   123078565   factor of DNA methylation 1 
 tae-r.2   123147378   factor of DNA methylation 1 
 hvu-r.1   123443902   factor of DNA methylation 1-like 
 hvu-r.1   123412222   factor of DNA methylation 1-like 
 hvu-r.1   123413430   protein INVOLVED IN DE NOVO 2-like 
 sbi-r.1   8058200   protein INVOLVED IN DE NOVO 2 
 sbi-r.1   8070401   factor of DNA methylation 1 
 bdi-r.1   100845608   factor of DNA methylation 1 
 bdi-r.1   100845391   factor of DNA methylation 1 
 bdi-r.1   100844776   factor of DNA methylation 1 

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Top 50 coexpressed genes to 107955128 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107955128 (ghi-r.1 coexpression data)

CoexMap"107955128"


ghiLOC107955128 | Entrez gene ID : 107955128    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 3 3 3 3 3 2 3 3 3 3 3 3 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (35 genes)  IEA  
GO CC
GO MF
Protein XP_016746341.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_016746341.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016746341.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107955128
ghi-r.1
for
107958454
ghi-r.1
for
107900468
ghi-r.1
for
107900469
ath-u.5
for
IDN2
ath-u.5
for
FDM2
bra-r.6
for
103830457
bra-r.6
for
103842874
bra-r.6
for
103872390
bna-r.1
for
125575041
bna-r.1
for
125591286
bna-r.1
for
111198617
cit-r.1
for
102620954
cit-r.1
for
102629124
cit-r.1
for
102629537
gma-u.5
for
100790829
gma-u.5
for
100798940
gma-u.5
for
102665742
vvi-u.5
for
100260350
vvi-u.5
for
100257549
vvi-u.5
for
100252420
ppo-u.5
for
7458138
ppo-u.5
for
18102687
ppo-u.5
for
7478299
mtr-u.5
for
11440090
mtr-u.5
for
11425283
mtr-u.5
for
25489298
sly-u.5
for
101256002
sly-u.5
for
101244470
sot-r.1
for
102598897
sot-r.1
for
102599221
sot-r.1
for
102585012
nta-r.1
for
107774607
nta-r.1
for
107806269
nta-r.1
for
107818442
osa-u.5
for
4329065
osa-u.5
for
4326595
osa-u.5
for
4325982
zma-u.5
for
100383007
zma-u.5
for
100279850
zma-u.5
for
100382110
tae-r.2
for
123096464
tae-r.2
for
123078565
tae-r.2
for
123147378
hvu-r.1
for
123443902
hvu-r.1
for
123412222
hvu-r.1
for
123413430
sbi-r.1
for
8058200
sbi-r.1
for
8070401
bdi-r.1
for
100845608
bdi-r.1
for
100845391
bdi-r.1
for
100844776


Ortholog ID: 752
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi bdi bdi bdi
Symbol LOC107900468 LOC107900469 LOC107942441 FDM2 FDM1 FDM5 LOC103842874 LOC103872390 LOC103873124 LOC106414893 LOC106430807 LOC106346801 LOC102620954 LOC102629124 LOC102624060 LOC100790829 LOC102665742 LOC100812353 LOC100257549 LOC100252420 LOC100244410 LOC7458138 LOC18102687 LOC7478299 LOC11425283 LOC25487893 LOC101256002 LOC101244470 LOC102598897 LOC102599221 LOC102585012 LOC107774607 LOC107806269 LOC107818569 LOC4329065 LOC4326595 LOC4325982 LOC100383007 LOC100279850 LOC100382110 LOC123091502 LOC123061513 LOC123443902 LOC123413430 LOC123443878 LOC8058200 LOC8070401 LOC100845608 LOC100845391 LOC100821394
Function* protein INVOLVED IN DE NOVO 2 protein INVOLVED IN DE NOVO 2 factor of DNA methylation 4 XH/XS domain-containing protein XH/XS domain-containing protein XH/XS domain-containing protein factor of DNA methylation 1-like factor of DNA methylation 1 protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1 protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1-like factor of DNA methylation 4 factor of DNA methylation 1 protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1 kinesin-like protein KIF20B protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1 factor of DNA methylation 1 protein INVOLVED IN DE NOVO 2 protein INVOLVED IN DE NOVO 2 factor of DNA methylation 4 factor of DNA methylation 1 factor of DNA methylation 1 factor of DNA methylation 4 protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1 factor of DNA methylation 1-like factor of DNA methylation 1-like protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1 factor of DNA methylation 1 factor of DNA methylation 4 factor of DNA methylation 1 protein INVOLVED IN DE NOVO 2 protein INVOLVED IN DE NOVO 2 putative XH domain family protein uncharacterized LOC100279850 putative XH domain family protein factor of DNA methylation 1 factor of DNA methylation 1 factor of DNA methylation 1-like protein INVOLVED IN DE NOVO 2-like factor of DNA methylation 1-like protein INVOLVED IN DE NOVO 2 factor of DNA methylation 1 factor of DNA methylation 1 factor of DNA methylation 1 factor of DNA methylation 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 5
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00052 Galactose metabolism 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi00020 Citrate cycle (TCA cycle) 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107900468 107900469 107942441 828016 838161 844418 103842874 103872390 103873124 106414893 106430807 106346801 102620954 102629124 102624060 100790829 102665742 100812353 100257549 100252420 100244410 7458138 18102687 7478299 11425283 25487893 101256002 101244470 102598897 102599221 102585012 107774607 107806269 107818569 4329065 4326595 4325982 100383007 100279850 100382110 123091502 123061513 123443902 123413430 123443878 8058200 8070401 100845608 100845391 100821394
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