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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107956984   transcription and mRNA export factor ENY2 
 ghi-r.1   107937121   transcription and mRNA export factor ENY2 
 ghi-r.1   107956987   transcription and mRNA export factor ENY2 
 ghi-r.1   107939210   transcription and mRNA export factor ENY2 
 ath-u.5   AT3G27100   transcription/mRNA export factor 
 bra-r.6   103836979   transcription and mRNA export factor ENY2 
 bna-r.1   106428890   transcription and mRNA export factor ENY2-like 
 bna-r.1   106415256   transcription and mRNA export factor ENY2 
 cit-r.1   102608482   transcription and mRNA export factor ENY2 
 gma-u.5   100527713   uncharacterized LOC100527713 
 gma-u.5   100500039   transcription and mRNA export factor ENY2 
 vvi-u.5   100258382   transcription and mRNA export factor ENY2 
 ppo-u.5   112325634   transcription and mRNA export factor ENY2 
 ppo-u.5   7456232   transcription and mRNA export factor ENY2 
 mtr-u.5   25497920   transcription and mRNA export factor ENY2 
 sly-u.5   101249142   transcription and mRNA export factor ENY2 
 sot-r.1   102602973   transcription and mRNA export factor SUS1 
 nta-r.1   107816545   transcription and mRNA export factor ENY2-like 
 nta-r.1   107799432   transcription and mRNA export factor ENY2 
 osa-u.5   4327741   transcription and mRNA export factor ENY2 
 zma-u.5   100193962   uncharacterized LOC100193962 
 zma-u.5   100282361   uncharacterized LOC100282361 
 tae-r.2   123080299   transcription and mRNA export factor ENY2 
 tae-r.2   123072011   transcription and mRNA export factor ENY2 
 tae-r.2   123063104   transcription and mRNA export factor ENY2 
 hvu-r.1   123445232   transcription and mRNA export factor ENY2 
 sbi-r.1   8079794   transcription and mRNA export factor SUS1 
 bdi-r.1   100821187   transcription and mRNA export factor ENY2 
 cre-r.1   CHLRE_08g370300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107956984 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107956984 (ghi-r.1 coexpression data)

CoexMap"107956984"


ghiLOC107956984 | Entrez gene ID : 107956984    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (36 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (680 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0071819 [list] [network] DUBm complex  (8 genes)  IEA  
GO:0000124 [list] [network] SAGA complex  (57 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (101 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (85 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
Protein XP_016747893.1 [sequence] [blastp]
XP_016747894.1 [sequence] [blastp]
XP_016747895.1 [sequence] [blastp]
XP_016747896.1 [sequence] [blastp]
XP_016747897.1 [sequence] [blastp]
XP_016747898.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto_nucl 2,  cysk 1  (predict for XP_016747893.1)
nucl 5,  cyto_nucl 3,  chlo 3,  extr 1,  cysk 1  (predict for XP_016747894.1)
nucl 4,  chlo 3,  cyto_nucl 3,  cysk 1,  chlo_mito 1  (predict for XP_016747895.1)
nucl 4,  chlo 4,  cyto_nucl 3,  extr 1,  cysk 1  (predict for XP_016747896.1)
nucl 4,  cyto_nucl 3,  chlo 1,  mito 1,  chlo_mito 1,  cyto 1,  plas 1,  golg_plas 1  (predict for XP_016747897.1)
nucl 4,  cyto_nucl 3,  chlo 1,  mito 1,  chlo_mito 1,  cyto 1,  plas 1,  golg_plas 1  (predict for XP_016747898.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_016747893.1)
chlo 8,  other 3  (predict for XP_016747894.1)
chlo 8,  other 3  (predict for XP_016747895.1)
chlo 8,  other 3  (predict for XP_016747896.1)
chlo 9,  other 3  (predict for XP_016747897.1)
chlo 9,  other 3  (predict for XP_016747898.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107956984
ghi-r.1
for
107937121
ghi-r.1
for
107956987
ghi-r.1
for
107939210
ath-u.5
for
AT3G27100
bra-r.6
for
103836979
bna-r.1
for
106428890
bna-r.1
for
106415256
cit-r.1
for
102608482
gma-u.5
for
100527713
gma-u.5
for
100500039
vvi-u.5
for
100258382
ppo-u.5
for
112325634
ppo-u.5
for
7456232
mtr-u.5
for
25497920
sly-u.5
for
101249142
sot-r.1
for
102602973
nta-r.1
for
107816545
nta-r.1
for
107799432
osa-u.5
for
4327741
zma-u.5
for
100193962
zma-u.5
for
100282361
tae-r.2
for
123080299
tae-r.2
for
123072011
tae-r.2
for
123063104
hvu-r.1
for
123445232
sbi-r.1
for
8079794
bdi-r.1
for
100821187
cre-r.1
for
CHLRE_08g370300v5


Ortholog ID: 6278
Species ghi ghi ghi ath bra bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107937121 LOC107904821 LOC107899720 AT3G27100 LOC103836979 LOC106415256 LOC102608482 LOC100527713 LOC100500039 LOC100258382 LOC112325634 LOC7456232 LOC25497920 LOC101249142 LOC102602973 LOC107816545 LOC107799432 LOC4327741 LOC100193962 LOC100282361 LOC123080299 LOC123072011 LOC123063104 LOC123445232 LOC8079794 LOC100821187 CHLRE_08g370300v5
Function* transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription/mRNA export factor transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 uncharacterized LOC100527713 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor SUS1 transcription and mRNA export factor ENY2-like transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 uncharacterized LOC100193962 uncharacterized LOC100282361 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor ENY2 transcription and mRNA export factor SUS1 transcription and mRNA export factor ENY2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04120 Ubiquitin mediated proteolysis 2
bna04136 Autophagy - other 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04144 Endocytosis 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa00600 Sphingolipid metabolism 2
osa04136 Autophagy - other 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03050 Proteasome 3
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107937121 107904821 107899720 822329 103836979 106415256 102608482 100527713 100500039 100258382 112325634 7456232 25497920 101249142 102602973 107816545 107799432 4327741 100193962 100282361 123080299 123072011 123063104 123445232 8079794 100821187 5726834
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