ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107957231	T-complex protein 1 subunit epsilon
ghi-r.1	107903904	T-complex protein 1 subunit epsilon
ghi-r.1	107922229	T-complex protein 1 subunit epsilon
ghi-r.1	107946254	T-complex protein 1 subunit epsilon
ath-u.5	AT1G24510	TCP-1/cpn60 chaperonin family protein
bra-r.6	103829122	T-complex protein 1 subunit epsilon
bra-r.6	103835425	T-complex protein 1 subunit epsilon
bra-r.6	103839069	T-complex protein 1 subunit epsilon
bna-r.1	111199796	T-complex protein 1 subunit epsilon
bna-r.1	125594979	T-complex protein 1 subunit epsilon-like
bna-r.1	106430684	T-complex protein 1 subunit epsilon
cit-r.1	102629313	T-complex protein 1 subunit epsilon
gma-u.5	100787183	T-complex protein 1 subunit epsilon
gma-u.5	100817323	T-complex protein 1 subunit epsilon
vvi-u.5	100264594	T-complex protein 1 subunit epsilon
vvi-u.5	100255682	T-complex protein 1 subunit epsilon
ppo-u.5	7486103	T-complex protein 1 subunit epsilon
ppo-u.5	7477067	T-complex protein 1 subunit epsilon
mtr-u.5	11433783	T-complex protein 1 subunit epsilon
sly-u.5	101251777	T-complex protein 1 subunit epsilon
sot-r.1	102593059	T-complex protein 1 subunit epsilon
sot-r.1	102598571	T-complex protein 1 subunit epsilon
nta-r.1	107815179	T-complex protein 1 subunit epsilon
nta-r.1	107763390	T-complex protein 1 subunit epsilon
osa-u.5	4341310	T-complex protein 1 subunit epsilon
zma-u.5	100272988	putative TCP-1/cpn60 chaperonin family protein
zma-u.5	100282671	cytosolic chaperonin CCT epsilon chain
tae-r.2	123128072	T-complex protein 1 subunit epsilon
tae-r.2	123148006	T-complex protein 1 subunit epsilon
tae-r.2	123163199	T-complex protein 1 subunit epsilon
hvu-r.1	123412977	T-complex protein 1 subunit epsilon
sbi-r.1	8059864	T-complex protein 1 subunit epsilon
sbi-r.1	8061981	T-complex protein 1 subunit epsilon
bdi-r.1	100840600	T-complex protein 1 subunit epsilon
bdi-r.1	100830440	T-complex protein 1 subunit epsilon
cre-r.1	CHLRE_03g156750v5	uncharacterized protein

Top 50 coexpressed genes to 107957231 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107957231 (ghi-r.1 coexpression data)

CoexMap"107957231"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006457 [list] [network] protein folding

(443 genes)

IEA

GO CC

GO:0005832 [list] [network] chaperonin-containing T-complex

(30 genes)

IEA

GO MF

GO:0140662 [list] [network] ATP-dependent protein folding chaperone	(139 genes)	IEA
GO:0051082 [list] [network] unfolded protein binding	(287 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(974 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5155 genes)	IEA

Protein

XP_016748176.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, mito 1, vacu 1, chlo_mito 1

(predict for XP_016748176.1)

Subcellular
localization
TargetP

other 6

(predict for XP_016748176.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107957231	ghi-r.1 for 107903904	ghi-r.1 for 107922229	ghi-r.1 for 107946254	ath-u.5 for AT1G24510	bra-r.6 for 103829122	bra-r.6 for 103835425	bra-r.6 for 103839069	bna-r.1 for 111199796	bna-r.1 for 125594979	bna-r.1 for 106430684	cit-r.1 for 102629313	gma-u.5 for 100787183	gma-u.5 for 100817323	vvi-u.5 for 100264594	vvi-u.5 for 100255682	ppo-u.5 for 7486103	ppo-u.5 for 7477067	mtr-u.5 for 11433783	sly-u.5 for 101251777	sot-r.1 for 102593059	sot-r.1 for 102598571	nta-r.1 for 107815179	nta-r.1 for 107763390	osa-u.5 for 4341310	zma-u.5 for 100272988	zma-u.5 for 100282671	tae-r.2 for 123128072	tae-r.2 for 123148006	tae-r.2 for 123163199	hvu-r.1 for 123412977	sbi-r.1 for 8059864	sbi-r.1 for 8061981	bdi-r.1 for 100840600	bdi-r.1 for 100830440	cre-r.1 for CHLRE_03g156750v5

Ortholog

Ortholog ID: 4466

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

T-complex protein 1 subunit epsilon

TCP-1/cpn60 chaperonin family protein

T-complex protein 1 subunit epsilon

T-complex protein 1 subunit epsilon-like

T-complex protein 1 subunit epsilon

putative TCP-1/cpn60 chaperonin family protein

cytosolic chaperonin CCT epsilon chain

T-complex protein 1 subunit epsilon

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	6
ghi00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	6
ghi00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	6
ghi00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2
bna00261	Monobactam biosynthesis	2
bna00300	Lysine biosynthesis	2
bna01230	Biosynthesis of amino acids	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00261	Monobactam biosynthesis	3
bna00300	Lysine biosynthesis	3
bna01230	Biosynthesis of amino acids	3
bna03040	Spliceosome	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00261	Monobactam biosynthesis	3
bna00300	Lysine biosynthesis	3
bna01230	Biosynthesis of amino acids	3
bna03040	Spliceosome	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00970	Aminoacyl-tRNA biosynthesis	3
cit01200	Carbon metabolism	2
cit00510	N-Glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	3
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	2
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	2
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	3
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	3
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2
zma03010	Ribosome	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00020	Citrate cycle (TCA cycle)	3
tae00190	Oxidative phosphorylation	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00020	Citrate cycle (TCA cycle)	3
tae00190	Oxidative phosphorylation	3
tae01200	Carbon metabolism	3
tae00100	Steroid biosynthesis	2
tae00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00970	Aminoacyl-tRNA biosynthesis	3
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	4
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	5
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03015	mRNA surveillance pathway	2
bdi04144	Endocytosis	2
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

107922229

107946254

107916601

839066

103829122

103835425

103839069

111199796

125594979

106358069

102629313

100787183

100817323

100264594

100255682

7486103

7477067

11433783

101251777

102593059

102598571

107815179

107763390

4341310

100272988

100282671

123128072

123163199

123181635

123412977

8059864

8061981

100840600

100830440

5723052

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	3	3	1	2	2	2	1	1	2	2	1	2	3	1	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107957231 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107957231 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**