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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-r.7   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-m.9   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-e.2   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.bio   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.hor   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.lig   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.str   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 ath-m.4.tis   AT1G24510   TCP-1/cpn60 chaperonin family protein 
 bra-r.6   103829122   T-complex protein 1 subunit epsilon 
 bra-r.6   103839069   T-complex protein 1 subunit epsilon 
 bra-r.6   103835425   T-complex protein 1 subunit epsilon 
 bna-r.1   106367347   T-complex protein 1 subunit epsilon-like 
 bna-r.1   106430684   T-complex protein 1 subunit epsilon 
 bna-r.1   111199796   T-complex protein 1 subunit epsilon 
 ghi-r.1   107957231   T-complex protein 1 subunit epsilon 
 ghi-r.1   107946254   T-complex protein 1 subunit epsilon 
 ghi-r.1   107916601   T-complex protein 1 subunit epsilon 
 cit-r.1   102629313   T-complex protein 1 subunit epsilon 
 gma-u.5   100817323   T-complex protein 1 subunit epsilon 
 gma-u.5   100787183   T-complex protein 1 subunit epsilon 
 vvi-u.5   100264594   T-complex protein 1 subunit epsilon 
 vvi-u.5   100255682   T-complex protein 1 subunit epsilon 
 ppo-u.5   7486103   T-complex protein 1 subunit epsilon 
 ppo-u.5   7477067   T-complex protein 1 subunit epsilon 
 mtr-u.5   11433783   T-complex protein 1 subunit epsilon 
 sly-u.5   101251777   T-complex protein 1 subunit epsilon 
 sot-r.1   102598571   T-complex protein 1 subunit epsilon 
 sot-r.1   102593059   T-complex protein 1 subunit epsilon 
 nta-r.1   107815179   T-complex protein 1 subunit epsilon 
 nta-r.1   107763390   T-complex protein 1 subunit epsilon 
 osa-u.5   4341310   T-complex protein 1 subunit epsilon 
 zma-u.5   100272988   putative TCP-1/cpn60 chaperonin family protein 
 zma-u.5   100282671   cytosolic chaperonin CCT epsilon chain 
 tae-r.2   123148006   T-complex protein 1 subunit epsilon 
 tae-r.2   123181635   T-complex protein 1 subunit epsilon 
 tae-r.2   123128072   T-complex protein 1 subunit epsilon 
 hvu-r.1   123412977   T-complex protein 1 subunit epsilon 
 sbi-r.1   8059864   T-complex protein 1 subunit epsilon 
 sbi-r.1   8061981   T-complex protein 1 subunit epsilon 
 bdi-r.1   100840600   T-complex protein 1 subunit epsilon 
 bdi-r.1   100830440   T-complex protein 1 subunit epsilon 
 cre-r.1   CHLRE_03g156750v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G24510 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G24510 (ath-u.5 coexpression data)

CoexMap"839066"


athAT1G24510 | Entrez gene ID : 839066      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 2 2 2 1 1 2 2 1 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (143 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001321715.1 [sequence] [blastp]
NP_173859.1 [sequence] [blastp]
NP_973907.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  pero 1  (predict for NP_001321715.1)
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_173859.1)
cyto 6,  cysk 2,  chlo 1,  vacu 1  (predict for NP_973907.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for NP_001321715.1)
other 6  (predict for NP_173859.1)
other 9  (predict for NP_973907.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G24510
ath-r.7
for
AT1G24510
ath-m.9
for
AT1G24510
ath-e.2
for
AT1G24510
ath-m.4.bio
for
AT1G24510
ath-m.4.hor
for
AT1G24510
ath-m.4.lig
for
AT1G24510
ath-m.4.str
for
AT1G24510
ath-m.4.tis
for
AT1G24510
bra-r.6
for
103829122
bra-r.6
for
103839069
bra-r.6
for
103835425
bna-r.1
for
106367347
bna-r.1
for
106430684
bna-r.1
for
111199796
ghi-r.1
for
107957231
ghi-r.1
for
107946254
ghi-r.1
for
107916601
cit-r.1
for
102629313
gma-u.5
for
100817323
gma-u.5
for
100787183
vvi-u.5
for
100264594
vvi-u.5
for
100255682
ppo-u.5
for
7486103
ppo-u.5
for
7477067
mtr-u.5
for
11433783
sly-u.5
for
101251777
sot-r.1
for
102598571
sot-r.1
for
102593059
nta-r.1
for
107815179
nta-r.1
for
107763390
osa-u.5
for
4341310
zma-u.5
for
100272988
zma-u.5
for
100282671
tae-r.2
for
123148006
tae-r.2
for
123181635
tae-r.2
for
123128072
hvu-r.1
for
123412977
sbi-r.1
for
8059864
sbi-r.1
for
8061981
bdi-r.1
for
100840600
bdi-r.1
for
100830440
cre-r.1
for
CHLRE_03g156750v5


Ortholog ID: 4466
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi vvi ppo ppo mtr sly sot sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol AT1G24510 LOC103829122 LOC103839069 LOC103835425 LOC111199796 LOC125594979 LOC106358069 LOC107946254 LOC107916601 LOC107922229 LOC102629313 LOC100817323 LOC100787183 LOC100264594 LOC100255682 LOC7486103 LOC7477067 LOC11433783 LOC101251777 LOC102598571 LOC102593059 LOC107815179 LOC107763390 LOC4341310 LOC100272988 LOC100282671 LOC123181635 LOC123128072 LOC123163199 LOC123412977 LOC8059864 LOC8061981 LOC100840600 LOC100830440 CHLRE_03g156750v5
Function* TCP-1/cpn60 chaperonin family protein T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon-like T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon putative TCP-1/cpn60 chaperonin family protein cytosolic chaperonin CCT epsilon chain T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon T-complex protein 1 subunit epsilon uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00261 Monobactam biosynthesis 2
bna00300 Lysine biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 6
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit01200 Carbon metabolism 2
cit00510 N-Glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03010 Ribosome 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00190 Oxidative phosphorylation 3
tae01200 Carbon metabolism 3
tae00100 Steroid biosynthesis 2
tae00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00190 Oxidative phosphorylation 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03015 mRNA surveillance pathway 2
bdi04144 Endocytosis 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839066 103829122 103839069 103835425 111199796 125594979 106358069 107946254 107916601 107922229 102629313 100817323 100787183 100264594 100255682 7486103 7477067 11433783 101251777 102598571 102593059 107815179 107763390 4341310 100272988 100282671 123181635 123128072 123163199 123412977 8059864 8061981 100840600 100830440 5723052
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